RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 TRPC5Q9UL62 973 aaPredicted RBP16.26■□□□□ 0.19
HIF3A-202ENST00000244303 FXR1P51114 621 aaKnown RBP eCLIP16.26■□□□□ 0.19
HIF3A-202ENST00000244303 ARL6IP4Q66PJ3 421 aaKnown RBP16.26■□□□□ 0.19
HIF3A-202ENST00000244303 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 TMED8Q6PL24 325 aaPredicted RBP16.26■□□□□ 0.19
HIF3A-202ENST00000244303 DYNLL2Q96FJ2 89 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 RWDD2AQ9UIY3 292 aa16.26■□□□□ 0.19
HIF3A-202ENST00000244303 ITIH6Q6UXX5 1313 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 ZRANB2O95218 330 aaKnown RBP eCLIP16.25■□□□□ 0.19
HIF3A-202ENST00000244303 TPM1P09493 284 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 PNMA6AP0CW24 399 aaPredicted RBP16.25■□□□□ 0.19
HIF3A-202ENST00000244303 LONP1P36776 959 aaKnown RBP16.25■□□□□ 0.19
HIF3A-202ENST00000244303 PAK1Q13153 545 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 ZNF658Q5TYW1 1059 aaPredicted RBP16.25■□□□□ 0.19
HIF3A-202ENST00000244303 C12orf60Q5U649 245 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 TYW1BQ6NUM6 668 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 CNGA4Q8IV77 575 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 LIMA1Q9UHB6 759 aaKnown RBP16.25■□□□□ 0.19
HIF3A-202ENST00000244303 MKRN1Q9UHC7 482 aaKnown RBP16.25■□□□□ 0.19
HIF3A-202ENST00000244303 PCDHA4Q9UN74 947 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 RPN1P04843 607 aaKnown RBP16.25■□□□□ 0.19
HIF3A-202ENST00000244303 USP5P45974 858 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 DGKHQ86XP1 1220 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 NELFBQ8WX92 580 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 VPS16Q9H269 839 aa16.25■□□□□ 0.19
HIF3A-202ENST00000244303 CDK5RAP2Q96SN8 1893 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 N4BP3O15049 544 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 HSPA1LP34931 641 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 TXLNAP40222 546 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 STAT6P42226 847 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 TERF2Q15554 542 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 TEX35Q5T0J7 233 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 WDR66Q8TBY9 1149 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 SH3RF3Q8TEJ3 882 aaPredicted RBP16.24■□□□□ 0.19
HIF3A-202ENST00000244303 SH3GLB2Q9NR46 395 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 PODXL2Q9NZ53 605 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 MAD2L2Q9UI95 211 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 MAPK8IP1Q9UQF2 711 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 GDAQ9Y2T3 454 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 USP17L3A6NCW0 530 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 USP17L4A6NCW7 530 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 LRRC10BA6NIK2 292 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 COPB1P53618 953 aaKnown RBP16.24■□□□□ 0.19
HIF3A-202ENST00000244303 RSRC2Q7L4I2 434 aaKnown RBP16.24■□□□□ 0.19
HIF3A-202ENST00000244303 RASGRP2Q7LDG7 609 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 USP17L1Q7RTZ2 530 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 RMND1Q9NWS8 449 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 TAB2Q9NYJ8 693 aa16.24■□□□□ 0.19
HIF3A-202ENST00000244303 M0R2N6 131 aa16.23■□□□□ 0.19
HIF3A-202ENST00000244303 SEC31AO94979 1220 aaKnown RBP16.23■□□□□ 0.19
HIF3A-202ENST00000244303 LDHBP07195 334 aaKnown RBP16.23■□□□□ 0.19
HIF3A-202ENST00000244303 GYS1P13807 737 aa16.23■□□□□ 0.19
HIF3A-202ENST00000244303 GRM4Q14833 912 aa16.23■□□□□ 0.19
HIF3A-202ENST00000244303 TCP11X2Q5H9J9 407 aa16.23■□□□□ 0.19
HIF3A-202ENST00000244303 GPR161Q8N6U8 529 aaKnown RBP16.23■□□□□ 0.19
HIF3A-202ENST00000244303 RPGRQ92834 1020 aaKnown RBP16.23■□□□□ 0.19
HIF3A-202ENST00000244303 CCDC51Q96ER9 411 aa16.23■□□□□ 0.19
HIF3A-202ENST00000244303 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
HIF3A-202ENST00000244303 MKNK2Q9HBH9 465 aa16.23■□□□□ 0.19
HIF3A-202ENST00000244303 DISC1Q9NRI5 854 aa16.23■□□□□ 0.19
HIF3A-202ENST00000244303 MTMR7Q9Y216 660 aa16.23■□□□□ 0.19
HIF3A-202ENST00000244303 CCDC194A0A1B0GVG4 234 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 KCNJ18B7U540 433 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 PRCPP42785 496 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 GPSM2P81274 684 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 SPAG1Q07617 926 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 KCNJ12Q14500 433 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 SLC35G1Q2M3R5 365 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 ANKS1AQ92625 1134 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 PCDHA6Q9UN73 950 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 PCDHA8Q9Y5H6 950 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 ROBO3Q96MS0 1386 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 A0A0U1RQG5 324 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-202ENST00000244303 PP2D1A8MPX8 630 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 RNF225M0QZC1 329 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-202ENST00000244303 CYTH3O43739 400 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 SERPINB2P05120 415 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 TSPY3P0CV98 308 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 TSPY8P0CW00 308 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 FECHP22830 423 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 PLA2G4AP47712 749 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 DIXDC1Q155Q3 683 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 NAALADL2Q58DX5 795 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 WWC2Q6AWC2 1192 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 DTHD1Q6ZMT9 781 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 ZNF804AQ7Z570 1209 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 CERKQ8TCT0 537 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 TMEM60Q9H2L4 133 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 ABHD10Q9NUJ1 306 aa16.22■□□□□ 0.19
HIF3A-202ENST00000244303 KIF5CO60282 957 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 ERVK-24P63145 666 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 GRIK5Q16478 980 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 C15orf52Q6ZUT6 534 aaKnown RBP16.21■□□□□ 0.19
HIF3A-202ENST00000244303 SLC44A5Q8NCS7 719 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 ACRBPQ8NEB7 543 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 ANKRD20A12PQ8NF67 263 aa16.21■□□□□ 0.19
HIF3A-202ENST00000244303 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
HIF3A-202ENST00000244303 TRIM49BA6NDI0 452 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms