RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 HEATR3Q7Z4Q2 680 aa18.33■□□□□ 0.52
UBE3D-201ENST00000237186 RASGRP4Q8TDF6 673 aa18.33■□□□□ 0.52
UBE3D-201ENST00000237186 ZNF592Q92610 1267 aa18.33■□□□□ 0.52
UBE3D-201ENST00000237186 CTAGE1Q96RT6 745 aa18.33■□□□□ 0.52
UBE3D-201ENST00000237186 ATP6V0A2Q9Y487 856 aa18.33■□□□□ 0.52
UBE3D-201ENST00000237186 PLIN4Q96Q06 1357 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 STX10O60499 249 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 GABPAQ06546 454 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 NCBP1Q09161 790 aaKnown RBP18.32■□□□□ 0.52
UBE3D-201ENST00000237186 TC2NQ8N9U0 490 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 CCSER1Q9C0I3 900 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 L2HGDHQ9H9P8 463 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 RMND1Q9NWS8 449 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 DAGLAQ9Y4D2 1042 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 NAV1Q8NEY1 1877 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 DDX60LQ5H9U9 1706 aaKnown RBP18.32■□□□□ 0.52
UBE3D-201ENST00000237186 SYNRGQ9UMZ2 1314 aa18.32■□□□□ 0.52
UBE3D-201ENST00000237186 LRRC10BA6NIK2 292 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
UBE3D-201ENST00000237186 MYL1P05976 194 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 PBX1P40424 430 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 CEP95Q96GE4 821 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 ADD3Q9UEY8 706 aaKnown RBP18.31■□□□□ 0.52
UBE3D-201ENST00000237186 RWDD2AQ9UIY3 292 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 GNA11P29992 359 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 ORC2Q13416 577 aaPredicted RBP18.31■□□□□ 0.52
UBE3D-201ENST00000237186 HSP90AA4PQ58FG1 418 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 ZNF658Q5TYW1 1059 aaPredicted RBP18.31■□□□□ 0.52
UBE3D-201ENST00000237186 KRT25Q7Z3Z0 450 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 RIOX1Q9H6W3 641 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 DISC1Q9NRI5 854 aa18.31■□□□□ 0.52
UBE3D-201ENST00000237186 BAZ2BQ9UIF8 2168 aaKnown RBP18.3■□□□□ 0.52
UBE3D-201ENST00000237186 LTBP1Q14766 1721 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 ESYT2A0FGR8 921 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 hCG_1984214I3L0E3 225 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 ZSCAN12O43309 604 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 ETF1P62495 437 aaKnown RBP18.3■□□□□ 0.52
UBE3D-201ENST00000237186 GTF2IP78347 998 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 INF2Q27J81 1249 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 REXO1L1PQ8IX06 675 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 ZNF713Q8N859 430 aaPredicted RBP18.3■□□□□ 0.52
UBE3D-201ENST00000237186 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 RRP36Q96EU6 259 aaKnown RBP18.3■□□□□ 0.52
UBE3D-201ENST00000237186 AK8Q96MA6 479 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 BAG1Q99933 345 aaPredicted RBP18.3■□□□□ 0.52
UBE3D-201ENST00000237186 TMEM60Q9H2L4 133 aa18.3■□□□□ 0.52
UBE3D-201ENST00000237186 GOLGA8HP0CJ92 632 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 NAALADL2Q58DX5 795 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 KLHL10Q6JEL2 608 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 NLGN1Q8N2Q7 840 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 BLZF1Q9H2G9 400 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 C6orf50Q9HD87 102 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 LRRC37AA6NMS7 1700 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 IGKV6D-41A0A0C4DH26 115 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 RPN1P04843 607 aaKnown RBP18.29■□□□□ 0.52
UBE3D-201ENST00000237186 NAPAP54920 295 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 USP17L2Q6R6M4 530 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 SMYD4Q8IYR2 804 aaPredicted RBP18.29■□□□□ 0.52
UBE3D-201ENST00000237186 STAMQ92783 540 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 MTMR4Q9NYA4 1195 aa18.29■□□□□ 0.52
UBE3D-201ENST00000237186 RGS17Q9UGC6 210 aaPredicted RBP18.29■□□□□ 0.52
UBE3D-201ENST00000237186 PHLPP2Q6ZVD8 1323 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 MYO3BQ8WXR4 1341 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 GOLGA6L9A6NEM1 432 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 SMCO2A6NFE2 343 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 SNHG28P0DPA3 235 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 SRGNP10124 158 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 STAT6P42226 847 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 STX17P56962 302 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 KCNB1Q14721 858 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 CCDC93Q567U6 631 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 ERO1AQ96HE7 468 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 PANX2Q96RD6 677 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 CCDC94Q9BW85 323 aaPredicted RBP18.28■□□□□ 0.52
UBE3D-201ENST00000237186 CUEDC2Q9H467 287 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 KBTBD4Q9NVX7 518 aa18.28■□□□□ 0.52
UBE3D-201ENST00000237186 LIMA1Q9UHB6 759 aaKnown RBP18.28■□□□□ 0.52
UBE3D-201ENST00000237186 TEX33O43247 280 aa18.27■□□□□ 0.52
UBE3D-201ENST00000237186 NPR1P16066 1061 aa18.27■□□□□ 0.52
UBE3D-201ENST00000237186 SPAG1Q07617 926 aa18.27■□□□□ 0.52
UBE3D-201ENST00000237186 KARSQ15046 597 aaKnown RBP18.27■□□□□ 0.52
UBE3D-201ENST00000237186 NONOQ15233 471 aaKnown RBP eCLIP18.27■□□□□ 0.52
UBE3D-201ENST00000237186 PTPN21Q16825 1174 aa18.27■□□□□ 0.52
UBE3D-201ENST00000237186 FILIP1LQ4L180 1135 aa18.27■□□□□ 0.52
UBE3D-201ENST00000237186 RRAGBQ5VZM2 374 aa18.27■□□□□ 0.52
UBE3D-201ENST00000237186 COL23A1Q86Y22 540 aaPredicted RBP18.27■□□□□ 0.52
UBE3D-201ENST00000237186 PDCL2Q8N4E4 241 aa18.27■□□□□ 0.52
UBE3D-201ENST00000237186 ZC3H12CQ9C0D7 883 aaKnown RBP18.27■□□□□ 0.52
UBE3D-201ENST00000237186 MAGEF1Q9HAY2 307 aa18.27■□□□□ 0.52
UBE3D-201ENST00000237186 SWAP70Q9UH65 585 aa18.27■□□□□ 0.52
UBE3D-201ENST00000237186 SLU7O95391 586 aaKnown RBP18.26■□□□□ 0.51
UBE3D-201ENST00000237186 PDHBP11177 359 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 CDC25AP30304 524 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 ALDH1B1P30837 517 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 UBA7P41226 1012 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 PAK1Q13153 545 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms