RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 CTR9Q6PD62 1173 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 SRGAP1Q7Z6B7 1085 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 SRBD1Q8N5C6 995 aaKnown RBP17.57■□□□□ 0.4
CTSD-201ENST00000236671 MTRQ99707 1265 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 BLZF1Q9H2G9 400 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 ARFGAP3Q9NP61 516 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 LIMA1Q9UHB6 759 aaKnown RBP17.57■□□□□ 0.4
CTSD-201ENST00000236671 KRT31Q15323 416 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 IL17AQ16552 155 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 IQUBQ8NA54 791 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.56■□□□□ 0.4
CTSD-201ENST00000236671 COBLO75128 1261 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 CCT6AP40227 531 aaKnown RBP17.56■□□□□ 0.4
CTSD-201ENST00000236671 CHMP4BP1P59074 171 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 EVX2Q03828 476 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 UBE4AQ14139 1066 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 CNBD1Q8NA66 436 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 FUT8Q9BYC5 575 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 CDC23Q9UJX2 597 aa17.56■□□□□ 0.4
CTSD-201ENST00000236671 LRRC10BA6NIK2 292 aa17.55■□□□□ 0.4
CTSD-201ENST00000236671 TRAPPC10P48553 1259 aa17.55■□□□□ 0.4
CTSD-201ENST00000236671 JAKMIP3Q5VZ66 844 aa17.55■□□□□ 0.4
CTSD-201ENST00000236671 RWDD2AQ9UIY3 292 aa17.55■□□□□ 0.4
CTSD-201ENST00000236671 CCDC151A5D8V7 595 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 USP17L12C9JPN9 530 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 USP17L21D6R901 530 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 ADAMTS3O15072 1205 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 POLR3GO15318 223 aaPredicted RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 GTPBP6O43824 516 aaPredicted RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 ORC4O43929 436 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 NMT2O60551 498 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 COL11A2P13942 1736 aaPredicted RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 OAS2P29728 719 aaKnown RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 ERVK-24P63145 666 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 RRAGBQ5VZM2 374 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 PIK3AP1Q6ZUJ8 805 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 CTCFLQ8NI51 663 aaPredicted RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 TTF2Q9UNY4 1162 aaKnown RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 SCG2P13521 617 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 POLD1P28340 1107 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 COPB1P53618 953 aaKnown RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 SMC1AQ14683 1233 aaKnown RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 ZNF569Q5MCW4 686 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 ANKRD18AQ8IVF6 992 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 ACRBPQ8NEB7 543 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 NLGN2Q8NFZ4 835 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 PYM1Q9BRP8 204 aaKnown RBP17.54■□□□□ 0.4
CTSD-201ENST00000236671 ZSWIM4Q9H7M6 989 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 ABHD10Q9NUJ1 306 aa17.54■□□□□ 0.4
CTSD-201ENST00000236671 LAMB1P07942 1786 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 RNF225M0QZC1 329 aaPredicted RBP17.53■□□□□ 0.4
CTSD-201ENST00000236671 CHRNA5P30532 468 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 PAK1Q13153 545 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 BRD3Q15059 726 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 LONRF2Q1L5Z9 754 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 TMTC1Q8IUR5 882 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 CEP112Q8N8E3 955 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 FAM84BQ96KN1 310 aaPredicted RBP17.53■□□□□ 0.4
CTSD-201ENST00000236671 ANKZF1Q9H8Y5 726 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 N4BP3O15049 544 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 VEGFAP15692 232 aaPredicted RBP17.53■□□□□ 0.4
CTSD-201ENST00000236671 MCM7P33993 719 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 NLRP5P59047 1200 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 SPAG1Q07617 926 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 PFKFB3Q16875 520 aaPredicted RBP17.53■□□□□ 0.4
CTSD-201ENST00000236671 CAVIN4Q5BKX8 364 aa17.53■□□□□ 0.4
CTSD-201ENST00000236671 NSUN4Q96CB9 384 aaKnown RBP17.53■□□□□ 0.4
CTSD-201ENST00000236671 FHDC1Q9C0D6 1143 aaPredicted RBP17.53■□□□□ 0.4
CTSD-201ENST00000236671 PUF60Q9UHX1 559 aaKnown RBP17.53■□□□□ 0.4
CTSD-201ENST00000236671 CDC25AP30304 524 aa17.52■□□□□ 0.4
CTSD-201ENST00000236671 TUBB2AQ13885 445 aa17.52■□□□□ 0.4
CTSD-201ENST00000236671 TCP11X2Q5H9J9 407 aa17.52■□□□□ 0.4
CTSD-201ENST00000236671 ZNF658Q5TYW1 1059 aaPredicted RBP17.52■□□□□ 0.4
CTSD-201ENST00000236671 SLC35F6Q8N357 371 aa17.52■□□□□ 0.4
CTSD-201ENST00000236671 NELFBQ8WX92 580 aa17.52■□□□□ 0.4
CTSD-201ENST00000236671 TUBB2BQ9BVA1 445 aa17.52■□□□□ 0.4
CTSD-201ENST00000236671 VPS16Q9H269 839 aa17.52■□□□□ 0.4
CTSD-201ENST00000236671 BSDC1Q9NW68 430 aaPredicted RBP17.52■□□□□ 0.4
CTSD-201ENST00000236671 TAB2Q9NYJ8 693 aa17.52■□□□□ 0.4
CTSD-201ENST00000236671 MINPP1Q9UNW1 487 aa17.52■□□□□ 0.4
CTSD-201ENST00000236671 MYH13Q9UKX3 1938 aa17.52■□□□□ 0.39
CTSD-201ENST00000236671 CTAGE9A4FU28 777 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 ABL1P00519 1130 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 ARHGAP25P42331 645 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 TRIM14Q14142 442 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 SF3B3Q15393 1217 aaKnown RBP17.51■□□□□ 0.39
CTSD-201ENST00000236671 FAM47AQ5JRC9 791 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 TPTE2Q6XPS3 522 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 C4orf32Q8N8J7 132 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 MSANTD4Q8NCY6 345 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 ZCCHC17Q9NP64 241 aaKnown RBP17.51■□□□□ 0.39
CTSD-201ENST00000236671 DCP1AQ9NPI6 582 aaPredicted RBP17.51■□□□□ 0.39
CTSD-201ENST00000236671 KIAA1551Q9HCM1 1747 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 KCNJ18B7U540 433 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 RPN1P04843 607 aaKnown RBP17.51■□□□□ 0.39
CTSD-201ENST00000236671 KCNJ12Q14500 433 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 KIF4BQ2VIQ3 1234 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 CYP26C1Q6V0L0 522 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 HNRNPLLQ8WVV9 542 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms