RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 TBC1D8BQ0IIM8 1120 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 TTC38Q5R3I4 469 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 MAATS1Q7Z4T9 603 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 IQUBQ8NA54 791 aa16.06■□□□□ 0.16
SFXN3-201ENST00000224807 AGPSO00116 658 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 STAT6P42226 847 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 MCTP2Q6DN12 878 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 SECISBP2LQ93073 1101 aaKnown RBP16.05■□□□□ 0.16
SFXN3-201ENST00000224807 STRBPQ96SI9 672 aaKnown RBP16.05■□□□□ 0.16
SFXN3-201ENST00000224807 NCAPGQ9BPX3 1015 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 DDX60Q8IY21 1712 aaKnown RBP16.05■□□□□ 0.16
SFXN3-201ENST00000224807 XDHP47989 1333 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 FAM237AA0A1B0GTK4 181 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 PRPF6O94906 941 aaKnown RBP16.05■□□□□ 0.16
SFXN3-201ENST00000224807 KRT2P35908 639 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 KIF5AQ12840 1032 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 TSEN2Q8NCE0 465 aaKnown RBP16.05■□□□□ 0.16
SFXN3-201ENST00000224807 CTCFLQ8NI51 663 aaPredicted RBP16.05■□□□□ 0.16
SFXN3-201ENST00000224807 MMRN2Q9H8L6 949 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
SFXN3-201ENST00000224807 PACSIN2Q9UNF0 486 aaPredicted RBP16.05■□□□□ 0.16
SFXN3-201ENST00000224807 XBP1P17861 261 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 AMPD2Q01433 879 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 IFT88Q13099 833 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 GPKOWQ92917 476 aaPredicted RBP eCLIP16.05■□□□□ 0.16
SFXN3-201ENST00000224807 CCDC42Q96M95 316 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 TANGO6Q9C0B7 1094 aa16.05■□□□□ 0.16
SFXN3-201ENST00000224807 TNKSO95271 1327 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 SPEF2Q9C093 1822 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 AKR1B10O60218 316 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 SETQ01105 290 aaPredicted RBP16.04■□□□□ 0.16
SFXN3-201ENST00000224807 SPA17Q15506 151 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 FAM47AQ5JRC9 791 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 TRAPPC11Q7Z392 1133 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 C2CD5Q86YS7 1000 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 SCLT1Q96NL6 688 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 CAPN6Q9Y6Q1 641 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 HLTFQ14527 1009 aaKnown RBP eCLIP16.04■□□□□ 0.16
SFXN3-201ENST00000224807 E2F5Q15329 346 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 TDRD12Q587J7 1177 aaKnown RBP16.04■□□□□ 0.16
SFXN3-201ENST00000224807 CDKAL1Q5VV42 579 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 TRIML1Q8N9V2 468 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 SHISA4Q96DD7 197 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
SFXN3-201ENST00000224807 BCAMP50895 628 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 CCNI2Q6ZMN8 369 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-201ENST00000224807 CCDC43Q96MW1 224 aaKnown RBP16.03■□□□□ 0.16
SFXN3-201ENST00000224807 NHEJ1Q9H9Q4 299 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-201ENST00000224807 CSGALNACT2Q8N6G5 542 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 NFU1Q9UMS0 254 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 TMEM94Q12767 1356 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 SOS2Q07890 1332 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-201ENST00000224807 HSF2BPO75031 334 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-201ENST00000224807 RPN1P04843 607 aaKnown RBP16.03■□□□□ 0.16
SFXN3-201ENST00000224807 TRADDQ15628 312 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 HLFQ16534 295 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 CT47A1Q5JQC4 288 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-201ENST00000224807 ANKLE2Q86XL3 938 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.03■□□□□ 0.16
SFXN3-201ENST00000224807 DCAF5Q96JK2 942 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 MTRQ99707 1265 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 FOXP1Q9H334 677 aaPredicted RBP16.03■□□□□ 0.16
SFXN3-201ENST00000224807 HAUS4Q9H6D7 363 aa16.03■□□□□ 0.16
SFXN3-201ENST00000224807 RDXP35241 583 aaKnown RBP16.02■□□□□ 0.16
SFXN3-201ENST00000224807 MAP3K12Q12852 859 aa16.02■□□□□ 0.16
SFXN3-201ENST00000224807 ODF2Q5BJF6 829 aa16.02■□□□□ 0.16
SFXN3-201ENST00000224807 CCDC91Q7Z6B0 441 aa16.02■□□□□ 0.16
SFXN3-201ENST00000224807 KLHL7Q8IXQ5 586 aa16.02■□□□□ 0.16
SFXN3-201ENST00000224807 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.16
SFXN3-201ENST00000224807 WTIPA6NIX2 430 aaPredicted RBP16.02■□□□□ 0.15
SFXN3-201ENST00000224807 PBX1P40424 430 aa16.02■□□□□ 0.15
SFXN3-201ENST00000224807 IFIT1BQ5T764 474 aaKnown RBP16.02■□□□□ 0.15
SFXN3-201ENST00000224807 TTLL11Q8NHH1 800 aa16.02■□□□□ 0.15
SFXN3-201ENST00000224807 NACAP1Q9BZK3 213 aa16.02■□□□□ 0.15
SFXN3-201ENST00000224807 NLRC4Q9NPP4 1024 aa16.02■□□□□ 0.15
SFXN3-201ENST00000224807 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.02■□□□□ 0.15
SFXN3-201ENST00000224807 MEGF6O75095 1541 aa16.02■□□□□ 0.15
SFXN3-201ENST00000224807 ANKRD18BA2A2Z9 1011 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 E7EVH7 732 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 CYP7A1P22680 504 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 GUCY2DQ02846 1103 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 GBP6Q6ZN66 633 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 MB21D1Q8N884 522 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 GSDMAQ96QA5 445 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 CXorf56Q9H5V9 222 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 HGSO14964 777 aaPredicted RBP16.01■□□□□ 0.15
SFXN3-201ENST00000224807 CYLC1P35663 651 aaPredicted RBP16.01■□□□□ 0.15
SFXN3-201ENST00000224807 CKAP4Q07065 602 aaKnown RBP16.01■□□□□ 0.15
SFXN3-201ENST00000224807 NNTQ13423 1086 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 RASGRF1Q13972 1273 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 KCNV1Q6PIU1 500 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 WDR59Q6PJI9 974 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 DNAJC10Q8IXB1 793 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 OR2W6PQ8NHA6 318 aa16.01■□□□□ 0.15
SFXN3-201ENST00000224807 GSG1L2A8MUP6 293 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 NT5DC1Q5TFE4 455 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 C8orf74Q6P047 294 aa16■□□□□ 0.15
SFXN3-201ENST00000224807 WDR93Q6P2C0 686 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms