RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 PRAMEF1O95521 474 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 MPOP05164 745 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 ARL4AP40617 200 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 YBX1P67809 324 aaKnown RBP5.14□□□□□ -1.59
CDKN3-201ENST00000216414 KIR3DS1Q14943 382 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 BBS9Q3SYG4 887 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 SPATS1Q496A3 300 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 TMC6Q7Z403 805 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 TMEFF1Q8IYR6 380 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 LINC00116Q8NCU8 138 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 MZB1Q8WU39 189 aa5.14□□□□□ -1.59
CDKN3-201ENST00000216414 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.14□□□□□ -1.59
CDKN3-201ENST00000216414 GPR55Q9Y2T6 319 aaPredicted RBP5.14□□□□□ -1.59
CDKN3-201ENST00000216414 MEIS1O00470 390 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 IRS4O14654 1257 aaPredicted RBP5.13□□□□□ -1.59
CDKN3-201ENST00000216414 ERVFRD-1P60508 538 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 PWP1Q13610 501 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 RAB3GAP1Q15042 981 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 NBPF9Q3BBW0 867 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 HSF5Q4G112 596 aaPredicted RBP5.13□□□□□ -1.59
CDKN3-201ENST00000216414 NBPF12Q5TAG4 269 aaPredicted RBP5.13□□□□□ -1.59
CDKN3-201ENST00000216414 GALNT18Q6P9A2 607 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 FAM129CQ86XR2 697 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 CRELD1Q96HD1 420 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 FCRL2Q96LA5 508 aaPredicted RBP5.13□□□□□ -1.59
CDKN3-201ENST00000216414 ADAM7Q9H2U9 754 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 KLHL14Q9P2G3 628 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 MINPP1Q9UNW1 487 aa5.13□□□□□ -1.59
CDKN3-201ENST00000216414 WTIPA6NIX2 430 aaPredicted RBP5.12□□□□□ -1.59
CDKN3-201ENST00000216414 FADS2P1A8MWK0 482 aa5.12□□□□□ -1.59
CDKN3-201ENST00000216414 NUDT19A8MXV4 375 aa5.12□□□□□ -1.59
CDKN3-201ENST00000216414 POLR2BP30876 1174 aaKnown RBP5.12□□□□□ -1.59
CDKN3-201ENST00000216414 CWF19L2Q2TBE0 894 aaKnown RBP5.12□□□□□ -1.59
CDKN3-201ENST00000216414 TMC4Q7Z404 712 aa5.12□□□□□ -1.59
CDKN3-201ENST00000216414 LDHDQ86WU2 507 aa5.12□□□□□ -1.59
CDKN3-201ENST00000216414 ZNF512BQ96KM6 892 aaPredicted RBP5.12□□□□□ -1.59
CDKN3-201ENST00000216414 PWWP2AQ96N64 755 aa5.12□□□□□ -1.59
CDKN3-201ENST00000216414 RSRP1Q9BUV0 290 aa5.12□□□□□ -1.59
CDKN3-201ENST00000216414 TNFRSF10DQ9UBN6 386 aa5.12□□□□□ -1.59
CDKN3-201ENST00000216414 SIGLEC6O43699 453 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 BUB1BO60566 1050 aaPredicted RBP5.11□□□□□ -1.59
CDKN3-201ENST00000216414 PRKCAP17252 672 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 NCKAP1LP55160 1127 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 CYP4F8P98187 520 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 PLP2Q04941 152 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 TMEM62Q0P6H9 643 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 LAPTM5Q13571 262 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 PUM1Q14671 1186 aaKnown RBP eCLIP5.11□□□□□ -1.59
CDKN3-201ENST00000216414 OVOS1Q6IE37 1185 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 FAM196AQ6ZSG2 479 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 IGDCC3Q8IVU1 814 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 NUP43Q8NFH3 380 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 CDADC1Q9BWV3 514 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 PRDM14Q9GZV8 571 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 MRS2Q9HD23 443 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 LUC7LQ9NQ29 371 aaKnown RBP5.11□□□□□ -1.59
CDKN3-201ENST00000216414 CHST7Q9NS84 486 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 GMIPQ9P107 970 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 VTI1BQ9UEU0 232 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 PCDHB14Q9Y5E9 798 aa5.11□□□□□ -1.59
CDKN3-201ENST00000216414 PATL2C9JE40 543 aaKnown RBP5.1□□□□□ -1.59
CDKN3-201ENST00000216414 SORBS3O60504 671 aa5.1□□□□□ -1.59
CDKN3-201ENST00000216414 CLEC3AO75596 197 aa5.1□□□□□ -1.59
CDKN3-201ENST00000216414 INSRRP14616 1297 aa5.1□□□□□ -1.59
CDKN3-201ENST00000216414 RAD51AP2Q09MP3 1159 aa5.1□□□□□ -1.59
CDKN3-201ENST00000216414 LINC01356Q8N9X3 169 aa5.1□□□□□ -1.59
CDKN3-201ENST00000216414 TEPSINQ96N21 525 aa5.1□□□□□ -1.59
CDKN3-201ENST00000216414 BRMS1Q9HCU9 246 aa5.1□□□□□ -1.59
CDKN3-201ENST00000216414 ERVK13-1Q9NX77 482 aa5.1□□□□□ -1.59
CDKN3-201ENST00000216414 ZC3H12DA2A288 527 aaKnown RBP5.09□□□□□ -1.59
CDKN3-201ENST00000216414 ENDOUP21128 410 aaKnown RBP5.09□□□□□ -1.59
CDKN3-201ENST00000216414 GARTP22102 1010 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 ERICH6Q7L0X2 663 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 SLCO6A1Q86UG4 719 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 GPR20Q99678 358 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 BDH2Q9BUT1 245 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 MKRN2Q9H000 416 aaKnown RBP5.09□□□□□ -1.59
CDKN3-201ENST00000216414 KBTBD4Q9NVX7 518 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 GFOD1Q9NXC2 390 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 FBXL21Q9UKT6 434 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 MYRFQ9Y2G1 1151 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 PCDHA5Q9Y5H7 936 aa5.09□□□□□ -1.59
CDKN3-201ENST00000216414 A0A1W2PQ45 241 aaPredicted RBP5.08□□□□□ -1.6
CDKN3-201ENST00000216414 A0A1W2PQY0 241 aa5.08□□□□□ -1.6
CDKN3-201ENST00000216414 FBXL19Q6PCT2 694 aa5.08□□□□□ -1.6
CDKN3-201ENST00000216414 RPTNQ6XPR3 784 aa5.08□□□□□ -1.6
CDKN3-201ENST00000216414 TNFRSF12AQ9NP84 129 aa5.08□□□□□ -1.6
CDKN3-201ENST00000216414 AP5S1Q9NUS5 200 aa5.08□□□□□ -1.6
CDKN3-201ENST00000216414 IMPACTQ9P2X3 320 aa5.08□□□□□ -1.6
CDKN3-201ENST00000216414 SUPT16HQ9Y5B9 1047 aaKnown RBP5.08□□□□□ -1.6
CDKN3-201ENST00000216414 A0A1W2PQ27 194 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 A0A1W2PQ64 194 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 A0A1W2PQC6 194 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 A0A1W2PQD8 194 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 SUV39H1O43463 412 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 PFKLP17858 780 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 LIMS1P48059 325 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 ZNF200P98182 395 aaPredicted RBP5.07□□□□□ -1.6
CDKN3-201ENST00000216414 EFEMP1Q12805 493 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 PLEKHN1Q494U1 663 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms