RNA–Protein interactions for RNA: ENST00000216014.8

KDELR3-201, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDELR3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-201ENST00000216014 ZSCAN31Q96LW9 406 aaPredicted RBP23.26■■□□□ 1.31
KDELR3-201ENST00000216014 WDR33Q9C0J8 1336 aaKnown RBP23.26■■□□□ 1.31
KDELR3-201ENST00000216014 CYP2C8P10632 490 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 MCM2P49736 904 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 FASTKD5Q7L8L6 764 aaKnown RBP23.25■■□□□ 1.31
KDELR3-201ENST00000216014 ADGRF4Q8IZF3 695 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 ASCC2Q9H1I8 757 aaPredicted RBP23.25■■□□□ 1.31
KDELR3-201ENST00000216014 VAT1LQ9HCJ6 419 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 FOXD4L1Q9NU39 408 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 PRR12Q9ULL5 1215 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 PDHXO00330 501 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 FLOT1O75955 427 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 HOXA7P31268 230 aaPredicted RBP23.25■■□□□ 1.31
KDELR3-201ENST00000216014 CUL4AQ13619 759 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 GPATCH4Q5T3I0 446 aaKnown RBP23.25■■□□□ 1.31
KDELR3-201ENST00000216014 NSUN7Q8NE18 718 aaKnown RBP23.25■■□□□ 1.31
KDELR3-201ENST00000216014 KIFC2Q96AC6 838 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 ATG4CQ96DT6 458 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 P2RX7Q99572 595 aaKnown RBP23.25■■□□□ 1.31
KDELR3-201ENST00000216014 JMJD4Q9H9V9 463 aa23.25■■□□□ 1.31
KDELR3-201ENST00000216014 SH2B1Q9NRF2 756 aaPredicted RBP23.25■■□□□ 1.31
KDELR3-201ENST00000216014 MANSC4A6NHS7 340 aaPredicted RBP23.24■■□□□ 1.31
KDELR3-201ENST00000216014 USP17L15C9J2P7 530 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 USP17L13C9JLJ4 530 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 USP17L11C9JVI0 530 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 USP17L18D6R9N7 530 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 USP17L22D6RA61 530 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 USP17L17D6RBQ6 530 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 USP17L19D6RCP7 530 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 USP17L20D6RJB6 530 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 KIF5BP33176 963 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 STAT2P52630 851 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 USP17L24Q0WX57 530 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 SYDE2Q5VT97 1194 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 HSCBQ8IWL3 235 aa23.24■■□□□ 1.31
KDELR3-201ENST00000216014 SPDYE16A6NNV3 312 aaPredicted RBP23.23■■□□□ 1.31
KDELR3-201ENST00000216014 PPP1R11O60927 126 aaPredicted RBP23.23■■□□□ 1.31
KDELR3-201ENST00000216014 FDPSP14324 419 aaKnown RBP23.23■■□□□ 1.31
KDELR3-201ENST00000216014 ANKRD23Q86SG2 305 aa23.23■■□□□ 1.31
KDELR3-201ENST00000216014 SHISA4Q96DD7 197 aa23.23■■□□□ 1.31
KDELR3-201ENST00000216014 RIOX1Q9H6W3 641 aa23.23■■□□□ 1.31
KDELR3-201ENST00000216014 RBM28Q9NW13 759 aaKnown RBP23.23■■□□□ 1.31
KDELR3-201ENST00000216014 FEM1BQ9UK73 627 aa23.23■■□□□ 1.31
KDELR3-201ENST00000216014 PPP1R9AQ9ULJ8 1098 aa23.23■■□□□ 1.31
KDELR3-201ENST00000216014 IKQ13123 557 aaPredicted RBP23.22■■□□□ 1.31
KDELR3-201ENST00000216014 IFNL1Q8IU54 200 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 SPRYD3Q8NCJ5 442 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 IL27Q8NEV9 243 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 AIFM3Q96NN9 605 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 PIGSQ96S52 555 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 SLF1Q9BQI6 1058 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 IFNAR1P17181 557 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 DSG3P32926 999 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 TM4SF4P48230 202 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 NOGQ13253 232 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 REPS2Q8NFH8 660 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 MTMR8Q96EF0 704 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 SPZ1Q9BXG8 430 aa23.22■■□□□ 1.31
KDELR3-201ENST00000216014 PTPDC1A2A3K4 754 aa23.21■■□□□ 1.31
KDELR3-201ENST00000216014 PLA2G6O60733 806 aa23.21■■□□□ 1.31
KDELR3-201ENST00000216014 PKN1Q16512 942 aa23.21■■□□□ 1.31
KDELR3-201ENST00000216014 DDX11Q96FC9 970 aa23.21■■□□□ 1.31
KDELR3-201ENST00000216014 R3HDMLQ9H3Y0 253 aa23.21■■□□□ 1.31
KDELR3-201ENST00000216014 ADAMTS5Q9UNA0 930 aa23.21■■□□□ 1.31
KDELR3-201ENST00000216014 V9GY48 417 aaPredicted RBP23.21■■□□□ 1.31
KDELR3-201ENST00000216014 CNMDO75829 334 aa23.2■■□□□ 1.3
KDELR3-201ENST00000216014 COG2Q14746 738 aa23.2■■□□□ 1.3
KDELR3-201ENST00000216014 HOMER1Q86YM7 354 aa23.2■■□□□ 1.3
KDELR3-201ENST00000216014 SMARCC2Q8TAQ2 1214 aa23.2■■□□□ 1.3
KDELR3-201ENST00000216014 SLC26A6Q9BXS9 759 aa23.2■■□□□ 1.3
KDELR3-201ENST00000216014 TXNRD2Q9NNW7 524 aa23.2■■□□□ 1.3
KDELR3-201ENST00000216014 ZNF536O15090 1300 aa23.2■■□□□ 1.3
KDELR3-201ENST00000216014 HERVK_113P62684 666 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 FAM160B2Q86V87 743 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 PRPF38AQ8NAV1 312 aaKnown RBP23.19■■□□□ 1.3
KDELR3-201ENST00000216014 GJB4Q9NTQ9 266 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 BTBD7Q9P203 1132 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 VWA5AO00534 786 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 PPP2R5BQ15173 497 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 QRICH1Q2TAL8 776 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 CCDC174Q6PII3 467 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 CHURC1Q8WUH1 139 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 RANBP17Q9H2T7 1088 aaKnown RBP23.19■■□□□ 1.3
KDELR3-201ENST00000216014 ADGRA2Q96PE1 1338 aa23.19■■□□□ 1.3
KDELR3-201ENST00000216014 CCDC196A0A1B0GTZ2 297 aa23.18■■□□□ 1.3
KDELR3-201ENST00000216014 CPLX1O14810 134 aa23.18■■□□□ 1.3
KDELR3-201ENST00000216014 DHX16O60231 1041 aaKnown RBP23.18■■□□□ 1.3
KDELR3-201ENST00000216014 FMNL1O95466 1100 aaPredicted RBP23.18■■□□□ 1.3
KDELR3-201ENST00000216014 GNAQP50148 359 aa23.18■■□□□ 1.3
KDELR3-201ENST00000216014 IRX3P78415 501 aaPredicted RBP23.18■■□□□ 1.3
KDELR3-201ENST00000216014 CDC37Q16543 378 aaPredicted RBP23.18■■□□□ 1.3
KDELR3-201ENST00000216014 SLC38A10Q9HBR0 1119 aa23.18■■□□□ 1.3
KDELR3-201ENST00000216014 TMEM132BQ14DG7 1078 aa23.17■■□□□ 1.3
KDELR3-201ENST00000216014 TYW1BQ6NUM6 668 aa23.17■■□□□ 1.3
KDELR3-201ENST00000216014 DNAJC5GQ8N7S2 189 aa23.17■■□□□ 1.3
KDELR3-201ENST00000216014 GPKOWQ92917 476 aaPredicted RBP eCLIP23.17■■□□□ 1.3
KDELR3-201ENST00000216014 LZTS2Q9BRK4 669 aa23.17■■□□□ 1.3
KDELR3-201ENST00000216014 RBPJLQ9UBG7 517 aa23.17■■□□□ 1.3
KDELR3-201ENST00000216014 SLC45A1Q9Y2W3 748 aa23.17■■□□□ 1.3
KDELR3-201ENST00000216014 ZSWIM8A7E2V4 1837 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms