RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 CCDC69A6NI79 296 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 GOLGA8BA8MQT2 603 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 TRAK2O60296 914 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 F13A1P00488 732 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
SNU13-201ENST00000215956 CTDSPL2Q05D32 466 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 PKP1Q13835 747 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 PPP2R5BQ15173 497 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 MAP3K21Q5TCX8 1036 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 MCTP1Q6DN14 999 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 ZNF384Q8TF68 577 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 DCP1AQ9NPI6 582 aaPredicted RBP14.22□□□□□ -0.13
SNU13-201ENST00000215956 NEDD4P46934 1319 aa14.22□□□□□ -0.13
SNU13-201ENST00000215956 SPTBN5Q9NRC6 3674 aaKnown RBP14.21□□□□□ -0.13
SNU13-201ENST00000215956 ORC4O43929 436 aa14.21□□□□□ -0.13
SNU13-201ENST00000215956 KDM4AO75164 1064 aa14.21□□□□□ -0.13
SNU13-201ENST00000215956 FGRP09769 529 aa14.21□□□□□ -0.13
SNU13-201ENST00000215956 NCLP19338 710 aaKnown RBP14.21□□□□□ -0.13
SNU13-201ENST00000215956 CYP2B6P20813 491 aa14.21□□□□□ -0.13
SNU13-201ENST00000215956 WTAPQ15007 396 aa14.21□□□□□ -0.13
SNU13-201ENST00000215956 CTR9Q6PD62 1173 aa14.21□□□□□ -0.13
SNU13-201ENST00000215956 CHST3Q7LGC8 479 aa14.21□□□□□ -0.13
SNU13-201ENST00000215956 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
SNU13-201ENST00000215956 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.21□□□□□ -0.13
SNU13-201ENST00000215956 MORF4L1Q9UBU8 362 aa14.21□□□□□ -0.13
SNU13-201ENST00000215956 COL2A1P02458 1487 aaPredicted RBP14.21□□□□□ -0.13
SNU13-201ENST00000215956 CCDC196A0A1B0GTZ2 297 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 H3BQV1 296 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 RHBDL3P58872 404 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 RRP12Q5JTH9 1297 aaKnown RBP14.2□□□□□ -0.14
SNU13-201ENST00000215956 CYB5R4Q7L1T6 521 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 NSUN7Q8NE18 718 aaKnown RBP14.2□□□□□ -0.14
SNU13-201ENST00000215956 IGDCC4Q8TDY8 1250 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 SOCS4Q8WXH5 440 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 ZSWIM5Q9P217 1185 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 MTMR6Q9Y217 621 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 SLC12A7Q9Y666 1083 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 SIPA1L1O43166 1804 aa14.2□□□□□ -0.14
SNU13-201ENST00000215956 PTPDC1A2A3K4 754 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 VPS37CA5D8V6 355 aaPredicted RBP14.19□□□□□ -0.14
SNU13-201ENST00000215956 USP17L12C9JPN9 530 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 USP17L21D6R901 530 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 ZBTB43O43298 467 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
SNU13-201ENST00000215956 COL6A1P12109 1028 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 METAP2P50579 478 aaKnown RBP eCLIP14.19□□□□□ -0.144e-12■□□□□ 11
SNU13-201ENST00000215956 COL9A3Q14050 684 aaPredicted RBP14.19□□□□□ -0.14
SNU13-201ENST00000215956 SH3D19Q5HYK7 790 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 NUDT12Q9BQG2 462 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 ZSCAN16Q9H4T2 348 aaPredicted RBP14.19□□□□□ -0.14
SNU13-201ENST00000215956 MCM9Q9NXL9 1143 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 CDH23Q9H251 3354 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 MYO5AQ9Y4I1 1855 aaKnown RBP14.19□□□□□ -0.14
SNU13-201ENST00000215956 USP17L5A8MUK1 530 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 MBD3O95983 291 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 XRCC5P13010 732 aaKnown RBP14.19□□□□□ -0.14
SNU13-201ENST00000215956 CAP2P40123 477 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 CCT2P78371 535 aaKnown RBP14.19□□□□□ -0.14
SNU13-201ENST00000215956 IRX3P78415 501 aaPredicted RBP14.19□□□□□ -0.14
SNU13-201ENST00000215956 MDM2Q00987 491 aaPredicted RBP14.19□□□□□ -0.14
SNU13-201ENST00000215956 LY9Q9HBG7 655 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 AS3MTQ9HBK9 375 aa14.19□□□□□ -0.14
SNU13-201ENST00000215956 NID2Q14112 1375 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 CALM1P0DP23 149 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 CALM2P0DP24 149 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 CALM3P0DP25 149 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 RRP1BQ14684 758 aaKnown RBP14.18□□□□□ -0.14
SNU13-201ENST00000215956 LRRC26Q2I0M4 334 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 APOA5Q6Q788 366 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 TEX11Q8IYF3 940 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 TRMT44Q8IYL2 757 aaKnown RBP14.18□□□□□ -0.14
SNU13-201ENST00000215956 WASF1Q92558 559 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 GUCD1Q96NT3 240 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 BRPF3Q9ULD4 1205 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 CDK5RAP2Q96SN8 1893 aa14.18□□□□□ -0.14
SNU13-201ENST00000215956 ROBO3Q96MS0 1386 aa14.17□□□□□ -0.14
SNU13-201ENST00000215956 GOLGA8AA7E2F4 631 aa14.17□□□□□ -0.14
SNU13-201ENST00000215956 POLR3DP05423 398 aaPredicted RBP14.17□□□□□ -0.14
SNU13-201ENST00000215956 CACNB2Q08289 660 aaPredicted RBP14.17□□□□□ -0.14
SNU13-201ENST00000215956 MTMR2Q13614 643 aa14.17□□□□□ -0.14
SNU13-201ENST00000215956 GSE1Q14687 1217 aa14.17□□□□□ -0.14
SNU13-201ENST00000215956 KLHL40Q2TBA0 621 aa14.17□□□□□ -0.14
SNU13-201ENST00000215956 C12orf60Q5U649 245 aa14.17□□□□□ -0.14
SNU13-201ENST00000215956 FOXD4L5Q5VV16 416 aaPredicted RBP14.17□□□□□ -0.14
SNU13-201ENST00000215956 FAM109BQ6ICB4 259 aaPredicted RBP14.17□□□□□ -0.14
SNU13-201ENST00000215956 TMEM87AQ8NBN3 555 aa14.17□□□□□ -0.14
SNU13-201ENST00000215956 SH3RF3Q8TEJ3 882 aaPredicted RBP14.17□□□□□ -0.14
SNU13-201ENST00000215956 FOXD4L4Q8WXT5 416 aaPredicted RBP14.17□□□□□ -0.14
SNU13-201ENST00000215956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.17□□□□□ -0.14
SNU13-201ENST00000215956 DDX49Q9Y6V7 483 aaKnown RBP14.17□□□□□ -0.14
SNU13-201ENST00000215956 LTBP2Q14767 1821 aa14.16□□□□□ -0.14
SNU13-201ENST00000215956 POTEB2H3BUK9 544 aa14.16□□□□□ -0.14
SNU13-201ENST00000215956 RANBP6O60518 1105 aaKnown RBP14.16□□□□□ -0.14
SNU13-201ENST00000215956 JAK2O60674 1132 aa14.16□□□□□ -0.14
SNU13-201ENST00000215956 PEX10O60683 326 aa14.16□□□□□ -0.14
SNU13-201ENST00000215956 CCND3P30281 292 aaPredicted RBP14.16□□□□□ -0.14
SNU13-201ENST00000215956 HERVK_113P62684 666 aa14.16□□□□□ -0.14
SNU13-201ENST00000215956 LHX8Q68G74 356 aa14.16□□□□□ -0.14
SNU13-201ENST00000215956 ATL3Q6DD88 541 aa14.16□□□□□ -0.14
SNU13-201ENST00000215956 GPRC5AQ8NFJ5 357 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms