RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 VSTM4Q8IW00 320 aa29.6■■■□□ 2.33
RTN4R-201ENST00000043402 GSDMAQ96QA5 445 aa29.6■■■□□ 2.33
RTN4R-201ENST00000043402 KCNQ5Q9NR82 932 aa29.6■■■□□ 2.33
RTN4R-201ENST00000043402 ERCC5P28715 1186 aaPredicted RBP29.6■■■□□ 2.33
RTN4R-201ENST00000043402 GTF2F1P35269 517 aaKnown RBP eCLIP29.6■■■□□ 2.33
RTN4R-201ENST00000043402 LONP1P36776 959 aaKnown RBP29.6■■■□□ 2.33
RTN4R-201ENST00000043402 FLAD1Q8NFF5 587 aa29.6■■■□□ 2.33
RTN4R-201ENST00000043402 SAMSN1Q9NSI8 373 aaKnown RBP29.6■■■□□ 2.33
RTN4R-201ENST00000043402 PDHBP11177 359 aa29.59■■■□□ 2.33
RTN4R-201ENST00000043402 NAPAP54920 295 aa29.59■■■□□ 2.33
RTN4R-201ENST00000043402 CDC42EP5Q6NZY7 148 aa29.59■■■□□ 2.33
RTN4R-201ENST00000043402 UBA5Q9GZZ9 404 aa29.59■■■□□ 2.33
RTN4R-201ENST00000043402 VAT1LQ9HCJ6 419 aa29.59■■■□□ 2.33
RTN4R-201ENST00000043402 SMARCA1P28370 1054 aa29.59■■■□□ 2.33
RTN4R-201ENST00000043402 APOBEC3HQ6NTF7 200 aaKnown RBP29.59■■■□□ 2.33
RTN4R-201ENST00000043402 CLEC10AQ8IUN9 316 aa29.59■■■□□ 2.33
RTN4R-201ENST00000043402 FAM177A1Q8N128 213 aaPredicted RBP29.59■■■□□ 2.33
RTN4R-201ENST00000043402 ZNF622Q969S3 477 aaKnown RBP eCLIP29.59■■■□□ 2.33
RTN4R-201ENST00000043402 RRP36Q96EU6 259 aaKnown RBP29.59■■■□□ 2.33
RTN4R-201ENST00000043402 PIGSQ96S52 555 aa29.59■■■□□ 2.33
RTN4R-201ENST00000043402 MYH8P13535 1937 aa29.58■■■□□ 2.33
RTN4R-201ENST00000043402 IGKV6D-41A0A0C4DH26 115 aa29.58■■■□□ 2.33
RTN4R-201ENST00000043402 CUL4BQ13620 913 aa29.58■■■□□ 2.33
RTN4R-201ENST00000043402 SMYD4Q8IYR2 804 aaPredicted RBP29.58■■■□□ 2.33
RTN4R-201ENST00000043402 CCAR2Q8N163 923 aaKnown RBP29.58■■■□□ 2.33
RTN4R-201ENST00000043402 BLZF1Q9H2G9 400 aa29.58■■■□□ 2.33
RTN4R-201ENST00000043402 KCND1Q9NSA2 647 aa29.58■■■□□ 2.33
RTN4R-201ENST00000043402 RIOK3O14730 519 aaKnown RBP29.57■■■□□ 2.32
RTN4R-201ENST00000043402 DBNDD1Q9H9R9 158 aa29.57■■■□□ 2.32
RTN4R-201ENST00000043402 HHIPL2Q6UWX4 724 aa29.57■■■□□ 2.32
RTN4R-201ENST00000043402 LRRC47Q8N1G4 583 aaKnown RBP29.57■■■□□ 2.32
RTN4R-201ENST00000043402 RIOX1Q9H6W3 641 aa29.57■■■□□ 2.32
RTN4R-201ENST00000043402 TRMT1Q9NXH9 659 aaKnown RBP29.57■■■□□ 2.32
RTN4R-201ENST00000043402 SERPINB13Q9UIV8 391 aa29.57■■■□□ 2.32
RTN4R-201ENST00000043402 FRMPD2Q68DX3 1309 aaPredicted RBP29.56■■■□□ 2.32
RTN4R-201ENST00000043402 SMCO2A6NFE2 343 aa29.56■■■□□ 2.32
RTN4R-201ENST00000043402 EIF6P56537 245 aaKnown RBP29.56■■■□□ 2.32
RTN4R-201ENST00000043402 RBM10P98175 930 aaKnown RBP29.56■■■□□ 2.32
RTN4R-201ENST00000043402 TSC1Q92574 1164 aa29.56■■■□□ 2.32
RTN4R-201ENST00000043402 PPP1R3GB7ZBB8 358 aa29.56■■■□□ 2.32
RTN4R-201ENST00000043402 G3V3G9 751 aa29.56■■■□□ 2.32
RTN4R-201ENST00000043402 DCAF8Q5TAQ9 597 aa29.56■■■□□ 2.32
RTN4R-201ENST00000043402 E4F1Q66K89 784 aaPredicted RBP29.56■■■□□ 2.32
RTN4R-201ENST00000043402 NYAP1Q6ZVC0 841 aa29.56■■■□□ 2.32
RTN4R-201ENST00000043402 TEKT1Q969V4 418 aa29.56■■■□□ 2.32
RTN4R-201ENST00000043402 PYM1Q9BRP8 204 aaKnown RBP29.56■■■□□ 2.32
RTN4R-201ENST00000043402 TMX4Q9H1E5 349 aaPredicted RBP29.56■■■□□ 2.32
RTN4R-201ENST00000043402 CDK11BP21127 795 aaKnown RBP29.55■■■□□ 2.32
RTN4R-201ENST00000043402 NFIAQ12857 509 aa29.55■■■□□ 2.32
RTN4R-201ENST00000043402 KARSQ15046 597 aaKnown RBP29.55■■■□□ 2.32
RTN4R-201ENST00000043402 CT47A1Q5JQC4 288 aaPredicted RBP29.55■■■□□ 2.32
RTN4R-201ENST00000043402 ZNF772Q68DY9 489 aaPredicted RBP29.55■■■□□ 2.32
RTN4R-201ENST00000043402 KLHL10Q6JEL2 608 aa29.55■■■□□ 2.32
RTN4R-201ENST00000043402 DTHD1Q6ZMT9 781 aa29.55■■■□□ 2.32
RTN4R-201ENST00000043402 SEC63Q9UGP8 760 aaKnown RBP29.55■■■□□ 2.32
RTN4R-201ENST00000043402 SHMT1P34896 483 aa29.54■■■□□ 2.32
RTN4R-201ENST00000043402 CCDC12Q8WUD4 166 aaPredicted RBP29.54■■■□□ 2.32
RTN4R-201ENST00000043402 PP2D1A8MPX8 630 aa29.54■■■□□ 2.32
RTN4R-201ENST00000043402 SLURP2P0DP57 97 aa29.54■■■□□ 2.32
RTN4R-201ENST00000043402 DHX8Q14562 1220 aaKnown RBP29.54■■■□□ 2.32
RTN4R-201ENST00000043402 SNHG28P0DPA3 235 aa29.53■■■□□ 2.32
RTN4R-201ENST00000043402 STX17P56962 302 aa29.53■■■□□ 2.32
RTN4R-201ENST00000043402 PODNQ7Z5L7 613 aa29.53■■■□□ 2.32
RTN4R-201ENST00000043402 C2CD5Q86YS7 1000 aa29.53■■■□□ 2.32
RTN4R-201ENST00000043402 PDCL3Q9H2J4 239 aa29.53■■■□□ 2.32
RTN4R-201ENST00000043402 C6orf50Q9HD87 102 aa29.53■■■□□ 2.32
RTN4R-201ENST00000043402 SWAP70Q9UH65 585 aa29.53■■■□□ 2.32
RTN4R-201ENST00000043402 PCDHAC2Q9Y5I4 1007 aa29.53■■■□□ 2.32
RTN4R-201ENST00000043402 GTPBP6O43824 516 aaPredicted RBP29.52■■■□□ 2.32
RTN4R-201ENST00000043402 GNA11P29992 359 aa29.52■■■□□ 2.32
RTN4R-201ENST00000043402 CRKP46108 304 aa29.52■■■□□ 2.32
RTN4R-201ENST00000043402 GOLGA8FQ08AF8 430 aa29.52■■■□□ 2.32
RTN4R-201ENST00000043402 GOLGA8DPQ0D2H9 430 aa29.52■■■□□ 2.32
RTN4R-201ENST00000043402 NAALADL2Q58DX5 795 aa29.52■■■□□ 2.32
RTN4R-201ENST00000043402 SPATA1Q5VX52 437 aa29.52■■■□□ 2.32
RTN4R-201ENST00000043402 KRT25Q7Z3Z0 450 aa29.52■■■□□ 2.32
RTN4R-201ENST00000043402 ZFPM1Q8IX07 1006 aa29.52■■■□□ 2.32
RTN4R-201ENST00000043402 DISC1Q9NRI5 854 aa29.52■■■□□ 2.32
RTN4R-201ENST00000043402 SYNRGQ9UMZ2 1314 aa29.51■■■□□ 2.32
RTN4R-201ENST00000043402 SCN9AQ15858 1988 aa29.51■■■□□ 2.31
RTN4R-201ENST00000043402 TXLNAP40222 546 aa29.51■■■□□ 2.31
RTN4R-201ENST00000043402 NONOQ15233 471 aaKnown RBP eCLIP29.51■■■□□ 2.31
RTN4R-201ENST00000043402 APTXQ7Z2E3 356 aaKnown RBP29.51■■■□□ 2.31
RTN4R-201ENST00000043402 TMX1Q9H3N1 280 aa29.51■■■□□ 2.31
RTN4R-201ENST00000043402 SLX4Q8IY92 1834 aa29.51■■■□□ 2.31
RTN4R-201ENST00000043402 TTLL1O95922 423 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 TBX2Q13207 712 aaPredicted RBP29.5■■■□□ 2.31
RTN4R-201ENST00000043402 PTPN14Q15678 1187 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 ASPRV1Q53RT3 343 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 CEP135Q66GS9 1140 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 LAD1O00515 517 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 PRPHP41219 470 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 STAT6P42226 847 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 KCNJ6P48051 423 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 LETM2Q2VYF4 491 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 SOGA3Q5TF21 947 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 KIAA0825Q8IV33 1275 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 MYO3BQ8WXR4 1341 aa29.5■■■□□ 2.31
RTN4R-201ENST00000043402 NR1I3Q14994 352 aa29.49■■■□□ 2.31
RTN4R-201ENST00000043402 ZDHHC15Q96MV8 337 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms