RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Cabp7Q91ZM8 215 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Dnajc25A2ALW5 357 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Kcna1P16388 495 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Qrich1Q3UA37 777 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ccdc189Q6NZQ0 333 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ercc6lQ8BHK9 1240 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Atxn7Q8R4I1 867 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Krt79Q8VED5 531 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Pex3Q9QXY9 372 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Arfgef1G3X9K3 1846 aaKnown RBP10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Btn2a2A4QPC6 514 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Jakmip3Q5DTN8 844 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Nap1l5Q9JJF0 156 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Rsph10bE9PYQ0 876 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Csf1rP09581 977 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Gcnt1Q09324 428 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Klhdc9Q3USL1 350 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 PsdQ5DTT2 1024 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ccnt1Q9QWV9 724 aaKnown RBP10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Azi2Q9QYP6 405 aa10.76□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Jakmip2D3YXK0 820 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 GmnnO88513 206 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Sept2P42208 361 aaKnown RBP10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Krt87Q6IMF0 495 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Scfd1Q8BRF7 639 aaKnown RBP10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 GlyctkQ8QZY2 523 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 SmapQ9R0P4 181 aaKnown RBP10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Krt78E9Q0F0 1068 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 LtkP08923 888 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Anp32eP97822 260 aaKnown RBP10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ttbk2Q3UVR3 1243 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ankrd40Q5SUE8 363 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 PigsQ6PD26 555 aaKnown RBP10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Kcnf1Q7TSH7 493 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Filip1Q9CS72 1211 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Cbx6Q9DBY5 414 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Flt1P35969 1333 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Myh13B1AR69 1938 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Flvcr1B2RXV4 560 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ssrp1Q08943 708 aaKnown RBP10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Asic1Q6NXK8 526 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 PrimpolQ6P1E7 537 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Enox1Q8BHR2 643 aaKnown RBP10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ankk1Q8BZ25 745 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Mettl5Q8K1A0 209 aa10.75□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Tmem132bF7BAB2 1078 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 AaasP58742 546 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Bag1Q60739 355 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Krt39Q6IFX4 482 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 CenpqQ9CPQ5 267 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ptf1aQ9QX98 324 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Frmpd4A2AFR3 1320 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Prss51A0A286YDY8 319 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Wnt7aP24383 349 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Vcam1P29533 739 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Pla2g4eQ50L42 875 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Tpm4Q6IRU2 248 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Cep135Q6P5D4 1140 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 March6Q6ZQ89 909 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 GypcQ78HU7 95 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Nap1l4Q78ZA7 375 aaKnown RBP10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Bst2Q8R2Q8 172 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Snrnp35Q9D384 244 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Sgpp1Q9JI99 430 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Arl6ip4Q9JM93 229 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Magi2Q9WVQ1 1275 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Gm7356A0A087WSA6 508 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Rbm12b2Q66JV4 834 aaKnown RBP10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Ppp1r11Q8K1L5 131 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Rsbn1lD3Z0K6 821 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Pip4k2aO70172 405 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Mboat4P0C7A3 435 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Gdf10P97737 476 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Prom2Q3UUY6 835 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Gm2163Q6PCY5 473 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Dlg1Q811D0 905 aaKnown RBP10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 OplahQ8K010 1288 aa10.74□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Tnni3kQ5GIG6 834 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Aggf1Q7TN31 711 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Lrrc15Q80X72 579 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Anks1bQ8BIZ1 1259 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Arid5bQ8BM75 1188 aaKnown RBP10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Scrn1Q9CZC8 414 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Zbed3Q9D0L1 228 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Phrf1A6H619 1682 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Gm5134E9QAB5 671 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Pak1O88643 545 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Krt18P05784 423 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Sema3eP70275 775 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Nlrp2Q4PLS0 1046 aaKnown RBP10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Tbc1d9bQ5SVR0 1263 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Clca4aQ6Q473 924 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Fbxo18Q8K2I9 1042 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Apbb1ipQ8R5A3 670 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 AllcQ9JHX6 414 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Sned1Q70E20 1403 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Myh6Q02566 1938 aaKnown RBP10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Apol7aB2RT54 418 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Gse1Q3U3C9 1213 aa10.73□□□□□ -0.69
Sh3rf1-202ENSMUST00000209611 Bbs9Q811G0 885 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms