RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Gm4307E9PZY4 289 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Pde8bE9Q4S1 865 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Gm4312K9J7E2 289 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Atp8a2P98200 1148 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Sf3b2Q3UJB0 878 aaKnown RBP12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Bbof1Q3V079 533 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ckap2Q3V1H1 664 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Gm12185Q5NCB2 835 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 PnocQ64387 187 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Txnrd1Q9JMH6 613 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 CenphQ9QYM8 241 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Crb1Q8VHS2 1405 aa12.8□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Hap1O35668 628 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Kctd19Q562E2 927 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Elf1Q60775 612 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Serpinb6Q60854 378 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Madcam1Q61826 405 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Tas2r124Q7M718 309 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ccdc181Q80ZU5 509 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Q8K2W9 541 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Nip7Q9CXK8 180 aaKnown RBP12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Pard3Q99NH2 1333 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 MthfslL7N466 203 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Card10P58660 1021 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 1700013D24RikQ0P521 120 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Smg7Q5RJH6 1138 aaKnown RBP12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Tsr1Q5SWD9 803 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Gnl3lQ6PGG6 577 aaKnown RBP12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Slc44a1Q6X893 653 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Spata4Q8K3V1 295 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ssfa2Q922B9 1252 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Stag1Q9D3E6 1258 aa12.79□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ulk4Q3V129 1303 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Hdgfl1Q2VPR5 283 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Spata5Q3UMC0 893 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 HelbQ6NVF4 1074 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Pabpc4Q6PHQ9 660 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Lrsam1Q80ZI6 727 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Atp1a1Q8VDN2 1023 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ribc1Q9D0B8 379 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Kcnq5Q9JK45 933 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Arl10Q9QXJ4 243 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Sec24cG3X972 1096 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Folh1O35409 752 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Cdh15P33146 784 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Slc12a2P55012 1205 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Atp8b1Q148W0 1251 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Baiap3Q80TT2 1134 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ddx42Q810A7 929 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Slfnl1Q8BHW9 410 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Stn1Q8K2X3 378 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Rapgef3Q8VCC8 918 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Grin3bQ91ZU9 1003 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Capn15Q9JLG8 1095 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Tob2Q9JM55 345 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 CluhQ5SW19 1315 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Cyp3a25O09158 503 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Bnip3O55003 187 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Cd3dP04235 173 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ppp1r1bQ60829 194 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Usp50Q6P8X6 390 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Atl2Q6PA06 583 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Txndc16Q7TN22 820 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ube3cQ80U95 1083 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ankrd24Q80VM7 985 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Spats2Q8K1N4 545 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Vmn1r218Q8R261 298 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Lztr1Q9CQ33 837 aa12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 RarsQ9D0I9 660 aaKnown RBP12.78□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Proca1B0QZF7 307 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Cyp26c1B2RXA7 518 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Tcp10bE9PYJ0 438 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Gm5134E9QAB5 671 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Akr1c19G3X9Y6 323 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Prl2c3P04768 224 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ccnl1Q52KE7 532 aaKnown RBP12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Sco1Q5SUC9 284 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 BcrQ6PAJ1 1270 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Krit1Q6S5J6 736 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 D130040H23RikQ8BII3 405 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Triml1Q8BVP1 470 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Cep95Q8BVV7 827 aa12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Ufl1Q8CCJ3 793 aaKnown RBP12.77□□□□□ -0.36
Prpf40b-208ENSMUST00000136980 Dennd3A2RT67 1274 aa12.77□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 ByslO54825 436 aaKnown RBP12.77□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Mnat1P51949 309 aa12.77□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Trim6Q8BGE7 488 aa12.77□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Tldc1Q8K0P3 455 aa12.77□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Thoc1Q8R3N6 657 aaKnown RBP12.77□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Riok1Q922Q2 567 aa12.77□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Ccdc43Q9CR29 222 aaKnown RBP12.77□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Gli3Q61602 1583 aa12.76□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Myh13B1AR69 1938 aa12.76□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Odf2A3KGV1 830 aaKnown RBP12.76□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Prr16A3KMN5 304 aa12.76□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Vmn2r78K7N6U5 853 aa12.76□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 MarcksP26645 309 aaKnown RBP12.76□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Pafah1b1P63005 410 aaKnown RBP12.76□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 Cnnm2Q3TWN3 875 aa12.76□□□□□ -0.37
Prpf40b-208ENSMUST00000136980 ErmapQ9JLN5 566 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms