RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Smarca1Q6PGB8 1046 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Scn10aQ6QIY3 1958 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tmc4Q7TQ65 694 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Plekhg6Q8R0J1 787 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Rbm42Q91V81 474 aaKnown RBP9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Hps4Q99KG7 671 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 A0A1L1SQF0 893 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Gm4985A2ALC6 410 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Cdkn1cP49919 348 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Nol4P60954 483 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Pex1Q5BL07 1284 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 MycbpapQ5SUV2 932 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 TfrcQ62351 763 aaKnown RBP9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Znf653Q6YND2 615 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Anapc4Q91W96 807 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Trmt112Q9DCG9 125 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tfap4Q9JIZ5 338 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Nr2e3Q9QXZ7 395 aa9.04□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ifi207E9Q3L4 978 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Nr1i2O54915 431 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ap5z1Q3U829 807 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Armc6Q8BNU0 468 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Myl6bQ8CI43 207 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tor1aip1Q921T2 595 aaKnown RBP9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Cyp2ab1S4R196 498 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Map7d1A2AJI0 846 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 MtrA6H5Y3 1253 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Tshz1Q5DTH5 1084 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Nab2Q61127 525 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ankrd13aQ80UP5 588 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Dnm3Q8BZ98 863 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ppp1r11Q8K1L5 131 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Txndc5Q91W90 417 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Trub2Q91WG3 331 aaKnown RBP9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ptf1aQ9QX98 324 aa9.03□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Arhgap4B1AUY3 965 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Gm973E9Q295 1059 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Krt18P05784 423 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Foxd1Q61345 456 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Krt39Q6IFX4 482 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Caps2Q8BUG5 550 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Fam161bQ8CB59 589 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Nod2Q8K3Z0 1020 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Ttll1Q91V51 423 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Mfap3Q922T2 349 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Xrcc4Q924T3 326 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 Vav3Q9R0C8 847 aa9.02□□□□□ -0.96
Ccdc60-201ENSMUST00000050178 A0A0U1RNP2 1173 aa9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 A430078G23RikE9Q7Y4 484 aa9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Gas2l3Q3UWW6 683 aa9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 D130040H23RikQ8BII3 405 aa9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 ParnQ8VDG3 624 aa9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Gmcl1Q920G9 524 aa9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 SynrgQ5SV85 1306 aa9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Bin1O08539 588 aaKnown RBP9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Myl3P09542 204 aa9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Dpf2Q61103 391 aaKnown RBP9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Gtf2iQ9ESZ8 998 aaKnown RBP9.02□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Zbtb21E9Q444 1094 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 EporP14753 507 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Kcna3P16390 528 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Tigd5Q499M4 642 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Mns1Q61884 491 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ptger2Q62053 362 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 CrkQ64010 304 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Mindy1Q76LS9 468 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Nup133Q8R0G9 1155 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Iqca1Q9CUL5 857 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Tube1Q9D6T1 475 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ifi202Q9R002 445 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 PfasQ5SUR0 1337 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Scgb2b19J3QM75 112 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Tpd52l1O54818 204 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Stx8O88983 236 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Pstpip1P97814 415 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Specc1lQ2KN98 1118 aaKnown RBP9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ell2Q3UKU1 639 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Ccna1Q61456 421 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Hs2st1Q8R3H7 356 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 CrygnQ8VHL5 183 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 MymkQ9D1N4 221 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Wdr64Q9D565 1086 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Myoz2Q9JJW5 264 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Hip1rQ9JKY5 1068 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Prl2c5Q9JLV9 222 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Znf568E9PYI1 671 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 GmnnO88513 206 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Gna11P21278 359 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Cnga2Q62398 664 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Rbm28Q8CGC6 750 aaKnown RBP9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 SltmQ8CH25 1031 aaKnown RBP9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Yipf1Q91VU1 306 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Pcdhb5Q91XZ5 792 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Rhobtb3Q9CTN4 611 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Baiap2l1Q9DBJ3 514 aa9.01□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Jakmip2D3YXK0 820 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Chrna9G3X8Z7 479 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 RdxP26043 583 aaKnown RBP9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Pnma5Q5DTT8 618 aa9□□□□□ -0.97
Ccdc60-201ENSMUST00000050178 Adgrg6Q6F3F9 1165 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms