RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Smarca1Q6PGB8 1046 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Gigyf2Q6Y7W8 1291 aaKnown RBP9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Q8C5C9 218 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Prpf6Q91YR7 941 aaKnown RBP9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Sept12Q9D451 317 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tnks1bp1P58871 1720 aa9.22□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Zfp275G3X904 499 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 ByslO54825 436 aaKnown RBP9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Pak1O88643 545 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 GpiP06745 558 aaKnown RBP9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Fam89aQ14BJ1 175 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Plekhf1Q3TB82 279 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Nlrp4eQ66X19 978 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cyp4x1Q6A152 507 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Tas2r124Q7M718 309 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Hook2Q7TMK6 716 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Cep85Q8BMK0 761 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Fam161bQ8CB59 589 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Osbpl1aQ91XL9 950 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Pik3ap1Q9EQ32 811 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Abhd2Q9QXM0 425 aa9.21□□□□□ -0.93
Cdc40-201ENSMUST00000044166 Pard3Q99NH2 1333 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 IkbkbO88351 757 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ap1g2O88512 791 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Lrrc4bP0C192 709 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Pth1rP41593 591 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Rad23bP54728 416 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Slc12a2P55012 1205 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ano9P86044 747 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Pabpc4Q6PHQ9 660 aaKnown RBP9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Glis3Q6XP49 780 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Eif4bQ8BGD9 611 aaKnown RBP9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Spata4Q8K3V1 295 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 GptQ8QZR5 496 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Hexim1Q8R409 356 aaKnown RBP9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ces1dQ8VCT4 565 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Rab3il1Q8VDV3 383 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Erlin1Q91X78 346 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 2310002L09RikQ9D7L5 217 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ulk4Q3V129 1303 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Cyp26c1B2RXA7 518 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Folh1O35409 752 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Enc1O35709 589 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Arhgap6O54834 987 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Dnm2P39054 870 aaKnown RBP9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Alox12eP55249 662 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Pla2g4fQ50L41 855 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Tmem232Q5K6N0 675 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Igf2bp2Q5SF07 592 aaKnown RBP9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Irak1Q62406 710 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Clca2Q8BG22 942 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Usp27Q8CEG8 438 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Txndc5Q91W90 417 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Rbm43Q99J64 343 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Hsd3b7Q9EQC1 369 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Morc1Q9WVL5 950 aa9.21□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ube3aO08759 870 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Akap2O54931 893 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Igbp1Q61249 340 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Sptlc3Q8BG54 563 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Fbxo38Q8BMI0 1194 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 NelfbQ8C4Y3 580 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Rbm28Q8CGC6 750 aaKnown RBP9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Lztr1Q9CQ33 837 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Dbndd2Q9CRD4 158 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 PyglQ9ET01 850 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Cyp3a25O09158 503 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Snx12O70493 165 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Sept1P42209 366 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Sf3b2Q3UJB0 878 aaKnown RBP9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Bbof1Q3V079 533 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Cnga2Q62398 664 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 BcrQ6PAJ1 1270 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Papd7Q6PB75 542 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Stambpl1Q76N33 436 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 PreplQ8C167 725 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Tango6Q8C3S2 1079 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Farp2Q91VS8 1065 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Srgap2Q91Z67 1071 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Atp6v1g1Q9CR51 118 aa9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Akap8Q9DBR0 687 aaKnown RBP9.2□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Cd3dP04235 173 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Nub1P54729 614 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Pafah1b1P63005 410 aaKnown RBP9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Stim2P83093 746 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ccdc42Q5SV66 316 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Foxd4Q60688 444 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Bpifb6Q8BU51 449 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Leng8Q8CBY3 785 aaKnown RBP9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 LgsnQ8CIX8 563 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Ccdc14Q8K2J4 934 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Trim29Q8R2Q0 587 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 ParnQ8VDG3 624 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Trap1Q9CQN1 706 aaKnown RBP9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Klhl10Q9D5V2 608 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Calml3Q9D6P8 149 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Crb1Q8VHS2 1405 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Pla2g4aP47713 748 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Kdm7aQ3UWM4 940 aa9.19□□□□□ -0.94
Cdc40-201ENSMUST00000044166 Galnt17Q7TT15 598 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms