RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Prrc2bQ7TPM1 1486 aaKnown RBP25.33■■□□□ 1.65
Sh3rf1-201ENSMUST00000034060 Klhl29Q80T74 875 aa25.33■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 AdarQ99MU3 1178 aaKnown RBP25.33■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Enox1Q8BHR2 643 aaKnown RBP25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Ankk1Q8BZ25 745 aa25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Nkiras1Q8CEC5 192 aa25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Scyl1Q9EQC5 806 aaKnown RBP25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Riox2Q8CD15 465 aa25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Sf3a3Q9D554 501 aaKnown RBP25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Morc4Q8BMD7 928 aa25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Arhgap42B2RQE8 841 aa25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Hspd1P63038 573 aaKnown RBP25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Kif11Q6P9P6 1052 aa25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Dmrt2Q8BG36 561 aa25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Kctd6Q8BNL5 237 aa25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Gdap1l1Q8VE33 370 aa25.32■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 ZfaP23607 742 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Rnf168Q80XJ2 565 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Dach1Q9QYB2 751 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Trim71Q1PSW8 855 aaKnown RBP25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Tor4aQ8BH02 426 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Glrx3Q9CQM9 337 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Nlrp5Q9R1M5 1163 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Acbd5Q5XG73 508 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Suds3Q8BR65 328 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Mei4Q8BRM6 389 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Add3Q9QYB5 706 aaKnown RBP25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Pck1Q9Z2V4 622 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Sestd1Q80UK0 696 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Dr1Q91WV0 176 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Foxo3Q9WVH4 672 aa25.31■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 WizO88286 1684 aaKnown RBP25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Cfap70D3YVL2 1141 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Pkp1P97350 728 aaKnown RBP25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Gm14685Q52KH6 695 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Gimap7Q8R379 293 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Taf7lQ9D3R9 471 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Kif21bQ9QXL1 1668 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Xrcc6P23475 608 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Gna14P30677 355 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Armc2Q3URY6 854 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Nlrp4fQ66X05 959 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Xrcc5P27641 732 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 VrtnQ3SYK4 740 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Gucy2fQ5SDA5 1108 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 IarsQ8BU30 1262 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 4930449I24RikQ9D5E3 319 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Kdm6aO70546 1401 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Ccdc84Q4VA36 332 aaKnown RBP25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Epn1Q80VP1 575 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Arhgap18Q8K0Q5 663 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Nrbf2Q8VCQ3 287 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Krt36B1AQ75 473 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Nsun2Q1HFZ0 757 aaKnown RBP25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Slc4a8Q8JZR6 1089 aa25.3■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Ftl1P29391 183 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Ephb4P54761 987 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Srrm1Q52KI8 946 aaKnown RBP25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 PicalmQ7M6Y3 660 aaKnown RBP25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Nek9Q8K1R7 984 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Cep85lA0A1W2P884 806 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Fbln2P37889 1221 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 OtulinQ3UCV8 352 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Klhl14Q69ZK5 630 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Cul1Q9WTX6 776 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Trim80Q3V061 624 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Adora1Q60612 326 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Unc5clQ6R653 518 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Anks1bQ8BIZ1 1259 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Myo1cQ9WTI7 1063 aa25.29■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Gm15262A0A140LIQ5 728 aa25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Eif4a1P60843 406 aaKnown RBP25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Map3k7Q62073 579 aa25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Phkg2Q9DB30 406 aa25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Xab2Q9DCD2 855 aaKnown RBP25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 DexiQ9WUQ7 95 aa25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Ets1P27577 440 aa25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Csgalnact2Q8C1F4 542 aa25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Cabcoco1Q8CDT7 208 aa25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 RpsaP14206 295 aaKnown RBP25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 DSCC1Q14AI0 399 aa25.28■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Gpr108Q91WD0 569 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Eme2Q56A04 373 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Slc27a1Q60714 646 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Galnt15Q9D2N8 638 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Orc3Q9JK30 715 aaKnown RBP25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Gm7995L7N2E4 160 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 EsrrgP62509 458 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Rabep2Q91WG2 554 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Usp19Q3UJD6 1360 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Cdcp1Q5U462 833 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Aggf1Q7TN31 711 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 AatfQ9JKX4 526 aaKnown RBP25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Znf335A2A5K6 1337 aa25.27■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Plbd2Q3TCN2 594 aa25.26■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Ccdc182Q9D9C6 152 aa25.26■■□□□ 1.64
Sh3rf1-201ENSMUST00000034060 Tnip3A0A1D5RMN0 279 aa25.26■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Zcchc17Q9ESX4 241 aaKnown RBP25.26■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Catsper1Q91ZR5 686 aa25.26■■□□□ 1.63
Sh3rf1-201ENSMUST00000034060 Trim28Q62318 834 aa25.26■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms