RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 GALNT17Q6IS24 598 aa18.88■□□□□ 0.61
PHGDH-216ENST00000641375 NOL7Q9UMY1 257 aaKnown RBP18.88■□□□□ 0.61
PHGDH-216ENST00000641375 SNHG28P0DPA3 235 aa18.87■□□□□ 0.61
PHGDH-216ENST00000641375 BCS1LQ9Y276 419 aa18.87■□□□□ 0.61
PHGDH-216ENST00000641375 USP17L5A8MUK1 530 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 TNIP1Q15025 636 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 FKBP1CQ5VVH2 108 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 FMR1NBQ8N0W7 255 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 LRRC47Q8N1G4 583 aaKnown RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 CCDC12Q8WUD4 166 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 TNFRSF25Q93038 417 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 RRP36Q96EU6 259 aaKnown RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 CSRNP1Q96S65 589 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 KANSL2Q9H9L4 492 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 BARHL2Q9NY43 387 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 ZNF70Q9UC06 446 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 SEC63Q9UGP8 760 aaKnown RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 MORC2Q9Y6X9 1032 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 LTBP3Q9NS15 1303 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 A0A1B0GVL5 298 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 NFKBIEO00221 500 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 MYO1BO43795 1136 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 CUTAO60888 179 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 PTGER2P43116 358 aa18.86■□□□□ 0.61
PHGDH-216ENST00000641375 EIF6P56537 245 aaKnown RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 RRAGDQ9NQL2 400 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 HERC5Q9UII4 1024 aaKnown RBP18.86■□□□□ 0.61
PHGDH-216ENST00000641375 BMP15O95972 392 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 SLC35G1Q2M3R5 365 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 SPDYE2Q495Y8 402 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 TMEM179Q6ZVK1 233 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 KRI1Q8N9T8 703 aaKnown RBP18.85■□□□□ 0.61
PHGDH-216ENST00000641375 FAM151AQ8WW52 585 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 PCDHA4Q9UN74 947 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 ARFGEF1Q9Y6D6 1849 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 TRIM75PA6NK02 468 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 VEGFAP15692 232 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-216ENST00000641375 TRAPPC10P48553 1259 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 NDUFA8P51970 172 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 HEATR3Q7Z4Q2 680 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 BLIDQ8IZY5 108 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 GPKOWQ92917 476 aaPredicted RBP eCLIP18.85■□□□□ 0.61
PHGDH-216ENST00000641375 RIOX1Q9H6W3 641 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 NYAP2Q9P242 653 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 PCDHB6Q9Y5E3 794 aa18.85■□□□□ 0.61
PHGDH-216ENST00000641375 FAM196BA6NMK8 535 aa18.84■□□□□ 0.61
PHGDH-216ENST00000641375 TCP10L2B9ZVM9 353 aa18.84■□□□□ 0.61
PHGDH-216ENST00000641375 hCG_1984214I3L0E3 225 aa18.84■□□□□ 0.61
PHGDH-216ENST00000641375 HSP90AA2PQ14568 343 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-216ENST00000641375 GPATCH4Q5T3I0 446 aaKnown RBP18.84■□□□□ 0.61
PHGDH-216ENST00000641375 WWC2Q6AWC2 1192 aa18.84■□□□□ 0.61
PHGDH-216ENST00000641375 RASGRP2Q7LDG7 609 aa18.84■□□□□ 0.61
PHGDH-216ENST00000641375 CKAP2LQ8IYA6 745 aa18.84■□□□□ 0.61
PHGDH-216ENST00000641375 ZNF713Q8N859 430 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-216ENST00000641375 RNF214Q8ND24 703 aa18.84■□□□□ 0.61
PHGDH-216ENST00000641375 MKL1Q969V6 931 aa18.84■□□□□ 0.61
PHGDH-216ENST00000641375 CLRN2A0PK11 232 aa18.83■□□□□ 0.61
PHGDH-216ENST00000641375 PSDA5PKW4 1024 aaPredicted RBP18.83■□□□□ 0.61
PHGDH-216ENST00000641375 ABCB5Q2M3G0 1257 aa18.83■□□□□ 0.61
PHGDH-216ENST00000641375 SASS6Q6UVJ0 657 aa18.83■□□□□ 0.61
PHGDH-216ENST00000641375 CLEC10AQ8IUN9 316 aa18.83■□□□□ 0.61
PHGDH-216ENST00000641375 DAGLBQ8NCG7 672 aa18.83■□□□□ 0.61
PHGDH-216ENST00000641375 STXBP3O00186 592 aa18.83■□□□□ 0.6
PHGDH-216ENST00000641375 RPS12P25398 132 aaKnown RBP18.83■□□□□ 0.6
PHGDH-216ENST00000641375 ATP2B2Q01814 1243 aa18.83■□□□□ 0.6
PHGDH-216ENST00000641375 ZNF543Q08ER8 600 aa18.83■□□□□ 0.6
PHGDH-216ENST00000641375 UVSSAQ2YD98 709 aa18.83■□□□□ 0.6
PHGDH-216ENST00000641375 FAM237AA0A1B0GTK4 181 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 PFKFB1P16118 471 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 TYRO3Q06418 890 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 EARS2Q5JPH6 523 aaKnown RBP18.82■□□□□ 0.6
PHGDH-216ENST00000641375 RESP18Q5W5W9 173 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 FAM83AQ86UY5 434 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 FRMPD2Q68DX3 1309 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-216ENST00000641375 SLURP2P0DP57 97 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 ATP2B1P20020 1258 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 PTPREP23469 700 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 CCDC173Q0VFZ6 552 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 RBM26Q5T8P6 1007 aaKnown RBP18.82■□□□□ 0.6
PHGDH-216ENST00000641375 HOMER1Q86YM7 354 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 ZNF579Q8NAF0 562 aaKnown RBP18.82■□□□□ 0.6
PHGDH-216ENST00000641375 ZBED3Q96IU2 234 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-216ENST00000641375 SDF4Q9BRK5 362 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 ZMYND12Q9H0C1 365 aa18.82■□□□□ 0.6
PHGDH-216ENST00000641375 FAM205CA6NFA0 338 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 ZNF202O95125 648 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 EEF2P13639 858 aaKnown RBP18.81■□□□□ 0.6
PHGDH-216ENST00000641375 ICA1Q05084 483 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 SHC4Q6S5L8 630 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 PIK3AP1Q6ZUJ8 805 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 TIGD1Q96MW7 591 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 CPVLQ9H3G5 476 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.81■□□□□ 0.62e-7■■■■□ 19.6
PHGDH-216ENST00000641375 VEZTQ9HBM0 779 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 MYOZ2Q9NPC6 264 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 HPSEQ9Y251 543 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 SRPRBQ9Y5M8 271 aaKnown RBP18.81■□□□□ 0.6
PHGDH-216ENST00000641375 CAVIN2O95810 425 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 GNA11P29992 359 aa18.81■□□□□ 0.6
PHGDH-216ENST00000641375 SYKP43405 635 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms