RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 LRRC47Q8N1G4 583 aaKnown RBP19.81■□□□□ 0.76
PHGDH-208ENST00000641023 CCDC12Q8WUD4 166 aaPredicted RBP19.81■□□□□ 0.76
PHGDH-208ENST00000641023 GMLQ99445 158 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 DNAJC18Q9H819 358 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 SEC63Q9UGP8 760 aaKnown RBP19.81■□□□□ 0.76
PHGDH-208ENST00000641023 PCDHA4Q9UN74 947 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 MORC2Q9Y6X9 1032 aaPredicted RBP19.81■□□□□ 0.76
PHGDH-208ENST00000641023 PSME4Q14997 1843 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 ATRNL1Q5VV63 1379 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 FAM237AA0A1B0GTK4 181 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 SPDYE2BA6NHP3 402 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 SPDYE6P0CI01 402 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 SNHG28P0DPA3 235 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 SYKP43405 635 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 SLC35G1Q2M3R5 365 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 EARS2Q5JPH6 523 aaKnown RBP19.8■□□□□ 0.76
PHGDH-208ENST00000641023 HEATR3Q7Z4Q2 680 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 BLIDQ8IZY5 108 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 AGBL3Q8NEM8 1001 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 TIGD1Q96MW7 591 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 CLIC6Q96NY7 704 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 TAOK3Q9H2K8 898 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 HPSEQ9Y251 543 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 R3HDM1Q15032 1099 aaKnown RBP19.8■□□□□ 0.76
PHGDH-208ENST00000641023 WWC2Q6AWC2 1192 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 TATDN1Q6P1N9 297 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 JDP2Q8WYK2 163 aa19.8■□□□□ 0.76
PHGDH-208ENST00000641023 SRPRBQ9Y5M8 271 aaKnown RBP19.8■□□□□ 0.76
PHGDH-208ENST00000641023 FAM205CA6NFA0 338 aa19.79■□□□□ 0.76
PHGDH-208ENST00000641023 ANO6Q4KMQ2 910 aa19.79■□□□□ 0.76
PHGDH-208ENST00000641023 PIK3AP1Q6ZUJ8 805 aa19.79■□□□□ 0.76
PHGDH-208ENST00000641023 RASGRP2Q7LDG7 609 aa19.79■□□□□ 0.76
PHGDH-208ENST00000641023 ZNF579Q8NAF0 562 aaKnown RBP19.79■□□□□ 0.76
PHGDH-208ENST00000641023 PDLIM2Q96JY6 352 aa19.79■□□□□ 0.76
PHGDH-208ENST00000641023 FBXO2Q9UK22 296 aaPredicted RBP19.79■□□□□ 0.76
PHGDH-208ENST00000641023 ZBTB12Q9Y330 459 aaPredicted RBP19.79■□□□□ 0.76
PHGDH-208ENST00000641023 METTL16Q86W50 562 aaKnown RBP19.79■□□□□ 0.76
PHGDH-208ENST00000641023 RIOX1Q9H6W3 641 aa19.79■□□□□ 0.76
PHGDH-208ENST00000641023 KANSL2Q9H9L4 492 aa19.79■□□□□ 0.76
PHGDH-208ENST00000641023 FAM13BQ9NYF5 915 aa19.79■□□□□ 0.76
PHGDH-208ENST00000641023 COL2A1P02458 1487 aaPredicted RBP19.79■□□□□ 0.76
PHGDH-208ENST00000641023 ATP2B2Q01814 1243 aa19.78■□□□□ 0.76
PHGDH-208ENST00000641023 TTC38Q5R3I4 469 aa19.78■□□□□ 0.76
PHGDH-208ENST00000641023 HOMER1Q86YM7 354 aa19.78■□□□□ 0.76
PHGDH-208ENST00000641023 CLEC10AQ8IUN9 316 aa19.78■□□□□ 0.76
PHGDH-208ENST00000641023 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
PHGDH-208ENST00000641023 CPVLQ9H3G5 476 aa19.78■□□□□ 0.76
PHGDH-208ENST00000641023 VAT1LQ9HCJ6 419 aa19.78■□□□□ 0.76
PHGDH-208ENST00000641023 CD2APQ9Y5K6 639 aa19.78■□□□□ 0.76
PHGDH-208ENST00000641023 COL4A5P29400 1685 aa19.78■□□□□ 0.76
PHGDH-208ENST00000641023 FAM196BA6NMK8 535 aa19.77■□□□□ 0.76
PHGDH-208ENST00000641023 hCG_1984214I3L0E3 225 aa19.77■□□□□ 0.76
PHGDH-208ENST00000641023 STXBP3O00186 592 aa19.77■□□□□ 0.76
PHGDH-208ENST00000641023 SLURP2P0DP57 97 aa19.77■□□□□ 0.76
PHGDH-208ENST00000641023 TYW1BQ6NUM6 668 aa19.77■□□□□ 0.76
PHGDH-208ENST00000641023 ZNF713Q8N859 430 aaPredicted RBP19.77■□□□□ 0.76
PHGDH-208ENST00000641023 CSRNP1Q96S65 589 aa19.77■□□□□ 0.76
PHGDH-208ENST00000641023 UBA5Q9GZZ9 404 aa19.77■□□□□ 0.76
PHGDH-208ENST00000641023 KCNH3Q9ULD8 1083 aa19.77■□□□□ 0.76
PHGDH-208ENST00000641023 STX1AQ16623 288 aa19.77■□□□□ 0.75
PHGDH-208ENST00000641023 GPATCH4Q5T3I0 446 aaKnown RBP19.77■□□□□ 0.75
PHGDH-208ENST00000641023 TMEM179Q6ZVK1 233 aa19.77■□□□□ 0.75
PHGDH-208ENST00000641023 MKL1Q969V6 931 aa19.77■□□□□ 0.75
PHGDH-208ENST00000641023 FRMPD2Q68DX3 1309 aaPredicted RBP19.77■□□□□ 0.75
PHGDH-208ENST00000641023 GNA11P29992 359 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 NAPAP54920 295 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 CXCL9Q07325 125 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 ZNF543Q08ER8 600 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 ZRSR1Q15695 479 aaKnown RBP19.76■□□□□ 0.75
PHGDH-208ENST00000641023 FERMT2Q96AC1 680 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 PIGSQ96S52 555 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 ZMYND12Q9H0C1 365 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 ANO10Q9NW15 660 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 NYAP2Q9P242 653 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 KIAA1468Q9P260 1216 aa19.76■□□□□ 0.75
PHGDH-208ENST00000641023 ZNF70Q9UC06 446 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-208ENST00000641023 HERC5Q9UII4 1024 aaKnown RBP19.76■□□□□ 0.75
PHGDH-208ENST00000641023 CCDC194A0A1B0GVG4 234 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 TCP10L2B9ZVM9 353 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 ZNF165P49910 485 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 CIAPIN1Q6FI81 312 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 MTMR14Q8NCE2 650 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 C6orf50Q9HD87 102 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 CLRN2A0PK11 232 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 M0R2N6 131 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 MYO1BO43795 1136 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 ZNF174Q15697 407 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 ABCB5Q2M3G0 1257 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 NOM1Q5C9Z4 860 aaKnown RBP19.75■□□□□ 0.75
PHGDH-208ENST00000641023 FAM151AQ8WW52 585 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 DNAJC25Q9H1X3 360 aa19.75■□□□□ 0.75
PHGDH-208ENST00000641023 GREB1LQ9C091 1923 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-208ENST00000641023 SIPA1L1O43166 1804 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 EEF2P13639 858 aaKnown RBP19.74■□□□□ 0.75
PHGDH-208ENST00000641023 SPDYE2Q495Y8 402 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 FKBP1CQ5VVH2 108 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 SGIP1Q9BQI5 828 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 GPCPD1Q9NPB8 672 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 USP25Q9UHP3 1055 aa19.74■□□□□ 0.75
PHGDH-208ENST00000641023 PCDHA6Q9UN73 950 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms