RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 MICU3Q86XE3 530 aa25.2■■□□□ 1.62
TSPAN9-208ENST00000640568 ZBTB43O43298 467 aa25.19■■□□□ 1.62
TSPAN9-208ENST00000640568 MOGSQ13724 837 aa25.19■■□□□ 1.62
TSPAN9-208ENST00000640568 APOA5Q6Q788 366 aa25.19■■□□□ 1.62
TSPAN9-208ENST00000640568 NOL8Q76FK4 1167 aaKnown RBP25.19■■□□□ 1.62
TSPAN9-208ENST00000640568 CTCFLQ8NI51 663 aaPredicted RBP25.19■■□□□ 1.62
TSPAN9-208ENST00000640568 ZIC5Q96T25 663 aa25.19■■□□□ 1.62
TSPAN9-208ENST00000640568 NUP88Q99567 741 aaPredicted RBP25.19■■□□□ 1.62
TSPAN9-208ENST00000640568 MYL10Q9BUA6 226 aa25.19■■□□□ 1.62
TSPAN9-208ENST00000640568 THSD7BQ9C0I4 1608 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 USP17L15C9J2P7 530 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 BTBD19C9JJ37 291 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 USP17L13C9JLJ4 530 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 USP17L11C9JVI0 530 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 USP17L18D6R9N7 530 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 USP17L22D6RA61 530 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 USP17L17D6RBQ6 530 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 USP17L19D6RCP7 530 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 USP17L20D6RJB6 530 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 PARP1P09874 1014 aaKnown RBP25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 USP17L24Q0WX57 530 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 IKQ13123 557 aaPredicted RBP25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 KCTD1Q719H9 257 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 ANKRD23Q86SG2 305 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 PNMA3Q9UL41 463 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 BRPF3Q9ULD4 1205 aa25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 FRMPD2Q68DX3 1309 aaPredicted RBP25.18■■□□□ 1.62
TSPAN9-208ENST00000640568 GOLGA8BA8MQT2 603 aa25.17■■□□□ 1.62
TSPAN9-208ENST00000640568 OSBPP22059 807 aa25.17■■□□□ 1.62
TSPAN9-208ENST00000640568 IRX3P78415 501 aaPredicted RBP25.17■■□□□ 1.62
TSPAN9-208ENST00000640568 TROAPQ12815 778 aa25.17■■□□□ 1.62
TSPAN9-208ENST00000640568 ASPRV1Q53RT3 343 aa25.17■■□□□ 1.62
TSPAN9-208ENST00000640568 RASGRP2Q7LDG7 609 aa25.17■■□□□ 1.62
TSPAN9-208ENST00000640568 RAB11FIP4Q86YS3 637 aa25.17■■□□□ 1.62
TSPAN9-208ENST00000640568 LARP6Q9BRS8 491 aaKnown RBP25.17■■□□□ 1.62
TSPAN9-208ENST00000640568 PARP14Q460N5 1801 aa25.17■■□□□ 1.62
TSPAN9-208ENST00000640568 PDHXO00330 501 aa25.16■■□□□ 1.62
TSPAN9-208ENST00000640568 SNHG28P0DPA3 235 aa25.16■■□□□ 1.62
TSPAN9-208ENST00000640568 RXRAP19793 462 aa25.16■■□□□ 1.62
TSPAN9-208ENST00000640568 KIF5BP33176 963 aa25.16■■□□□ 1.62
TSPAN9-208ENST00000640568 TM4SF4P48230 202 aa25.16■■□□□ 1.62
TSPAN9-208ENST00000640568 GPATCH4Q5T3I0 446 aaKnown RBP25.16■■□□□ 1.62
TSPAN9-208ENST00000640568 GPAT2Q6NUI2 795 aa25.16■■□□□ 1.62
TSPAN9-208ENST00000640568 IFNL1Q8IU54 200 aa25.16■■□□□ 1.62
TSPAN9-208ENST00000640568 CCDC144CPQ8IYA2 1237 aa25.16■■□□□ 1.62
TSPAN9-208ENST00000640568 GOLGA8AA7E2F4 631 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 FLOT1O75955 427 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 HOXA7P31268 230 aaPredicted RBP25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 METAP2P50579 478 aaKnown RBP eCLIP25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 ZNF543Q08ER8 600 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 GRM4Q14833 912 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 SAMD1Q6SPF0 538 aaPredicted RBP25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 CATSPERGQ6ZRH7 1159 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 FAM43AQ8N2R8 423 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 MAP3K14Q99558 947 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 PTPN18Q99952 460 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 GPCPD1Q9NPB8 672 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 SLC45A1Q9Y2W3 748 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 TMEM232C9JQI7 657 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 IGF2BP3O00425 579 aaKnown RBP eCLIP25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 GOLGA8HP0CJ92 632 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 STAT2P52630 851 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 RCAN1P53805 252 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 ZCCHC17Q9NP64 241 aaKnown RBP25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 FEM1BQ9UK73 627 aa25.15■■□□□ 1.62
TSPAN9-208ENST00000640568 EVCP57679 992 aa25.14■■□□□ 1.61
TSPAN9-208ENST00000640568 RTN1Q16799 776 aa25.14■■□□□ 1.61
TSPAN9-208ENST00000640568 FAM160B2Q86V87 743 aa25.14■■□□□ 1.61
TSPAN9-208ENST00000640568 CHURC1Q8WUH1 139 aa25.14■■□□□ 1.61
TSPAN9-208ENST00000640568 ZNF274Q96GC6 653 aaPredicted RBP25.14■■□□□ 1.61
TSPAN9-208ENST00000640568 RBM28Q9NW13 759 aaKnown RBP25.14■■□□□ 1.61
TSPAN9-208ENST00000640568 ALDH1A1P00352 501 aa25.13■■□□□ 1.61
TSPAN9-208ENST00000640568 FANCBQ8NB91 859 aa25.13■■□□□ 1.61
TSPAN9-208ENST00000640568 PARK7Q99497 189 aaKnown RBP25.13■■□□□ 1.61
TSPAN9-208ENST00000640568 MAD2L2Q9UI95 211 aa25.13■■□□□ 1.61
TSPAN9-208ENST00000640568 TPCN1Q9ULQ1 816 aa25.13■■□□□ 1.61
TSPAN9-208ENST00000640568 PDIA3P30101 505 aaKnown RBP25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 MCM2P49736 904 aa25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 GNAQP50148 359 aa25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 STK3Q13188 491 aa25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 COG2Q14746 738 aa25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 TAF1CQ15572 869 aaPredicted RBP25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 SMCR8Q8TEV9 937 aaPredicted RBP25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 SLF1Q9BQI6 1058 aa25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 ASCC2Q9H1I8 757 aaPredicted RBP25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 SLKQ9H2G2 1235 aaPredicted RBP25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 LIMCH1Q9UPQ0 1083 aa25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 MYH6P13533 1939 aa25.12■■□□□ 1.61
TSPAN9-208ENST00000640568 RLFQ13129 1914 aa25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 CCDC196A0A1B0GTZ2 297 aa25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 PALM3A6NDB9 673 aaPredicted RBP25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 DHX16O60231 1041 aaKnown RBP25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 PPP2R5BQ15173 497 aa25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 TTBK2Q6IQ55 1244 aa25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 STAG2Q8N3U4 1231 aa25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 KIFC2Q96AC6 838 aa25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 FBXO28Q9NVF7 368 aa25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 HOXC10Q9NYD6 342 aa25.11■■□□□ 1.61
TSPAN9-208ENST00000640568 KLRF2D3W0D1 207 aa25.1■■□□□ 1.61
TSPAN9-208ENST00000640568 PLA2G6O60733 806 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms