RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 CTAGE9A4FU28 777 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 PP2D1A8MPX8 630 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 KRT9P35527 623 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 KCNQ4P56696 695 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 RASGRP2Q7LDG7 609 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 CNGA4Q8IV77 575 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 CCDC24Q8N4L8 307 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 IQUBQ8NA54 791 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 CTCFLQ8NI51 663 aaPredicted RBP18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 CCDC87Q9NVE4 849 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 MYH6P13533 1939 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 BAZ2AQ9UIF9 1905 aaKnown RBP18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 PDE11AQ9HCR9 933 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 ABHD10Q9NUJ1 306 aa18.7■□□□□ 0.58
HNRNPU-228ENST00000640306 COPB1P53618 953 aaKnown RBP18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 ATP2C1P98194 919 aaPredicted RBP18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 NCAPH2Q6IBW4 605 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 TNFRSF25Q93038 417 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 GUCA1BQ9UMX6 200 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 CNTNAP5Q8WYK1 1306 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 COL4A1P02462 1669 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 ENC1O14682 589 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 KCNQ2O43526 872 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 N4BP1O75113 896 aaKnown RBP18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 CAMTA2O94983 1202 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 NTSR2O95665 410 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 UBXN1Q04323 297 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 PAK1Q13153 545 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 FAM182BQ5T319 152 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 JAKMIP3Q5VZ66 844 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 TFCP2L1Q9NZI6 479 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 NRAPQ86VF7 1730 aa18.69■□□□□ 0.58
HNRNPU-228ENST00000640306 ITGB4P16144 1822 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 KCNJ18B7U540 433 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 LMAN1P49257 510 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 KCNJ12Q14500 433 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 E2F4Q16254 413 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 NAA15Q9BXJ9 866 aaKnown RBP18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 CALCOCO1Q9P1Z2 691 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 COL1A1P02452 1464 aaPredicted RBP18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 PHACTR2O75167 634 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 HSPA1LP34931 641 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 PRCPP42785 496 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 UBXN6Q9BZV1 441 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 ABCB6Q9NP58 842 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 ANAPC4Q9UJX5 808 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 TIAM2Q8IVF5 1701 aa18.68■□□□□ 0.58
HNRNPU-228ENST00000640306 RCAN1P53805 252 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 PDXDC2PQ6P474 469 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 NOA1Q8NC60 698 aaKnown RBP18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 GNL3LQ9NVN8 582 aaKnown RBP18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 THRAP3Q9Y2W1 955 aaKnown RBP18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 MYH8P13535 1937 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 CCDC151A5D8V7 595 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 SCG2P13521 617 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 ITPK1Q13572 414 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 ERFEQ4G0M1 354 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 TCP11X2Q5H9J9 407 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 RBM28Q9NW13 759 aaKnown RBP18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 PMS1P54277 932 aaKnown RBP18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 VSNL1P62760 191 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 GPIHBP1Q8IV16 184 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 ANKRD18AQ8IVF6 992 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 VPS18Q9P253 973 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 HDAC6Q9UBN7 1215 aa18.67■□□□□ 0.58
HNRNPU-228ENST00000640306 BCL9LQ86UU0 1499 aa18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 FAM205AQ6ZU69 1335 aa18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 TSPY2A6NKD2 308 aa18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 ATP8B1O43520 1251 aa18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 RPN1P04843 607 aaKnown RBP18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 CAVIN4Q5BKX8 364 aa18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 CEP112Q8N8E3 955 aa18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 NAPGQ99747 312 aaPredicted RBP18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 MTA3Q9BTC8 594 aa18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 ADAM21Q9UKJ8 722 aa18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 STAT6P42226 847 aa18.66■□□□□ 0.58
HNRNPU-228ENST00000640306 PRDX5P30044 214 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 ARHGAP25P42331 645 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 BEND6Q5SZJ8 279 aaPredicted RBP18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 TMTC1Q8IUR5 882 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 CELF1Q92879 486 aaKnown RBP18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 FAM84BQ96KN1 310 aaPredicted RBP18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 AK7Q96M32 723 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 CDCA7Q9BWT1 371 aaPredicted RBP18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 TTF2Q9UNY4 1162 aaKnown RBP18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 DOCK2Q92608 1830 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 ANKRD36CQ5JPF3 1778 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 BMP15O95972 392 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 GTF2E1P29083 439 aaPredicted RBP18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 PPP2R5BQ15173 497 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 PTF1AQ7RTS3 328 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 HINFPQ9BQA5 517 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 USP21Q9UK80 565 aa18.65■□□□□ 0.58
HNRNPU-228ENST00000640306 LOC102724428A0A0B4J2F2 783 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 TTC26A0AVF1 554 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 CTAGE15A4D2H0 777 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 GTPBP6O43824 516 aaPredicted RBP18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 SRGAP2O75044 1071 aa18.64■□□□□ 0.58
HNRNPU-228ENST00000640306 CTAGE8P0CG41 777 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms