RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 SAMSN1Q9NSI8 373 aaKnown RBP16.06■□□□□ 0.16
SCARB2-216ENST00000639300 CEP152O94986 1710 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 CASP14P31944 242 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 GRIPAP1Q4V328 841 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 SRP68Q9UHB9 627 aaKnown RBP16.05■□□□□ 0.16
SCARB2-216ENST00000639300 PTPRMP28827 1452 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 ARHGEF35A5YM69 484 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 DDAH1O94760 285 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 PRPHP41219 470 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 ZRSR2Q15696 482 aaKnown RBP16.05■□□□□ 0.16
SCARB2-216ENST00000639300 MSL1Q68DK7 614 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 CLEC17AQ6ZS10 378 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 DYNLL2Q96FJ2 89 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 TRIM31Q9BZY9 425 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 TEKT1Q969V4 418 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 NOX5Q96PH1 765 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 PSTPIP2Q9H939 334 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 ARHGEF10LQ9HCE6 1279 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 HOMER2Q9NSB8 354 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 USP31Q70CQ4 1352 aa16.05■□□□□ 0.16
SCARB2-216ENST00000639300 H7C1D1 291 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 GCNT3O95395 438 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 IVLP07476 585 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 EZRP15311 586 aaKnown RBP16.04■□□□□ 0.16
SCARB2-216ENST00000639300 FAM196AQ6ZSG2 479 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 DPH6Q7L8W6 267 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 SMAP1Q8IYB5 467 aaPredicted RBP16.04■□□□□ 0.16
SCARB2-216ENST00000639300 MYCT1Q8N699 235 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 IMPG2Q9BZV3 1241 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 ATP6V0A2Q9Y487 856 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 TNFAIP3P21580 790 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 ASIC2Q16515 512 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 NBPF11Q86T75 865 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 GSDMAQ96QA5 445 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 GLT8D2Q9H1C3 349 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 EBAG9O00559 213 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 NSMFQ6X4W1 530 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 LARGE2Q8N3Y3 721 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 PAIP2Q9BPZ3 127 aaKnown RBP16.04■□□□□ 0.16
SCARB2-216ENST00000639300 CEP104O60308 925 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 MYCLP12524 364 aaPredicted RBP16.04■□□□□ 0.16
SCARB2-216ENST00000639300 DNM2P50570 870 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 PTPROQ16827 1216 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 STOX1Q6ZVD7 989 aa16.04■□□□□ 0.16
SCARB2-216ENST00000639300 MRPL44Q9H9J2 332 aaKnown RBP16.04■□□□□ 0.16
SCARB2-216ENST00000639300 H0YIN7 160 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 ACTN2P35609 894 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 CCDC50Q8IVM0 306 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 KLHL7Q8IXQ5 586 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 FAM76AQ8TAV0 307 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 PPP1R13BQ96KQ4 1090 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 MAN1B1Q9UKM7 699 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 SAR1BQ9Y6B6 198 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 TAF6LQ9Y6J9 622 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 IKBKBO14920 756 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 STX10O60499 249 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 PRR16Q569H4 304 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 CYB5R4Q7L1T6 521 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
SCARB2-216ENST00000639300 RASAL2Q9UJF2 1139 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
SCARB2-216ENST00000639300 EXOC3O60645 756 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 SLFN14P0C7P3 912 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 BIRC3Q13489 604 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 EPN1Q9Y6I3 576 aaPredicted RBP16.03■□□□□ 0.16
SCARB2-216ENST00000639300 CPS1P31327 1500 aa16.03■□□□□ 0.16
SCARB2-216ENST00000639300 GPBP1Q86WP2 473 aa16.02■□□□□ 0.16
SCARB2-216ENST00000639300 CCDC51Q96ER9 411 aa16.02■□□□□ 0.16
SCARB2-216ENST00000639300 ATP2B4P23634 1241 aa16.02■□□□□ 0.16
SCARB2-216ENST00000639300 COPB1P53618 953 aaKnown RBP16.02■□□□□ 0.16
SCARB2-216ENST00000639300 TUBB2AQ13885 445 aa16.02■□□□□ 0.16
SCARB2-216ENST00000639300 VWA3BQ502W6 1294 aa16.02■□□□□ 0.16
SCARB2-216ENST00000639300 MYOCDQ8IZQ8 938 aa16.02■□□□□ 0.16
SCARB2-216ENST00000639300 TUBB2BQ9BVA1 445 aa16.02■□□□□ 0.16
SCARB2-216ENST00000639300 ATP10DQ9P241 1426 aa16.02■□□□□ 0.16
SCARB2-216ENST00000639300 PLEKHA8P1O95397 391 aa16.02■□□□□ 0.15
SCARB2-216ENST00000639300 HPDP32754 393 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-216ENST00000639300 SND1Q7KZF4 910 aaKnown RBP eCLIP16.02■□□□□ 0.152e-6■■□□□ 13.9
SCARB2-216ENST00000639300 GSTA5Q7RTV2 222 aa16.02■□□□□ 0.15
SCARB2-216ENST00000639300 C10orf67Q8IYJ2 551 aa16.02■□□□□ 0.15
SCARB2-216ENST00000639300 UBLCP1Q8WVY7 318 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-216ENST00000639300 GJA3Q9Y6H8 435 aa16.02■□□□□ 0.15
SCARB2-216ENST00000639300 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.15
SCARB2-216ENST00000639300 OAS2P29728 719 aaKnown RBP16.02■□□□□ 0.15
SCARB2-216ENST00000639300 FOXO4P98177 505 aa16.02■□□□□ 0.15
SCARB2-216ENST00000639300 USP17L2Q6R6M4 530 aa16.02■□□□□ 0.15
SCARB2-216ENST00000639300 GPR101Q96P66 508 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-216ENST00000639300 SELENOSQ9BQE4 189 aa16.02■□□□□ 0.15
SCARB2-216ENST00000639300 A0A1W2PRG0 241 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 SPOPO43791 374 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 ERCC5P28715 1186 aaPredicted RBP16.01■□□□□ 0.15
SCARB2-216ENST00000639300 CASP1P29466 404 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 CYP4A11Q02928 519 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 KIFC2Q96AC6 838 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 GOLPH3LQ9H4A5 285 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 ADGRL3Q9HAR2 1447 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 PCP11498 1178 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms