RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 TRIM65Q6PJ69 517 aa12.04□□□□□ -0.48
NECAP1-216ENST00000639167 BLIDQ8IZY5 108 aa12.04□□□□□ -0.48
NECAP1-216ENST00000639167 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
NECAP1-216ENST00000639167 L2HGDHQ9H9P8 463 aa12.04□□□□□ -0.48
NECAP1-216ENST00000639167 CTNND2Q9UQB3 1225 aa12.04□□□□□ -0.48
NECAP1-216ENST00000639167 PPP2R2CQ9Y2T4 447 aa12.04□□□□□ -0.48
NECAP1-216ENST00000639167 A0A1B0GTH6 734 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 PPP1R3GB7ZBB8 358 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 TOM1O60784 492 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 E2F4Q16254 413 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 SLC35G1Q2M3R5 365 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 TOGARAM2Q6ZUX3 1019 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 RASGRP2Q7LDG7 609 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 APTXQ7Z2E3 356 aaKnown RBP12.03□□□□□ -0.48
NECAP1-216ENST00000639167 WDR66Q8TBY9 1149 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 GSDMAQ96QA5 445 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 ZMYND15Q9H091 742 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 MAST2Q6P0Q8 1798 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 ZSCAN12O43309 604 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 ERCC6LQ2NKX8 1250 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 KMT5BQ4FZB7 885 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 CCDC93Q567U6 631 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 TRAPPC3LQ5T215 181 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 FAM196AQ6ZSG2 479 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 DGKHQ86XP1 1220 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 IQUBQ8NA54 791 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 CPLX3Q8WVH0 158 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 MTRQ99707 1265 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 DESI2Q9BSY9 194 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 MAD2L2Q9UI95 211 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 STX8Q9UNK0 236 aa12.03□□□□□ -0.48
NECAP1-216ENST00000639167 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.03□□□□□ -0.48
NECAP1-216ENST00000639167 TRAPPC10P48553 1259 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 GRM4Q14833 912 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 MTF1Q14872 753 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 RRAGBQ5VZM2 374 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 PDXDC2PQ6P474 469 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 FCHSD1Q86WN1 690 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 CNBD1Q8NA66 436 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 ZNF397Q8NF99 534 aaPredicted RBP12.02□□□□□ -0.48
NECAP1-216ENST00000639167 CPVLQ9H3G5 476 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 LEMD3Q9Y2U8 911 aa12.02□□□□□ -0.48
NECAP1-216ENST00000639167 PHLPP2Q6ZVD8 1323 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 STX10O60499 249 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 URI1O94763 535 aaPredicted RBP12.02□□□□□ -0.49
NECAP1-216ENST00000639167 BAG3O95817 575 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 CALML3P27482 149 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 GPSM2P81274 684 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 KARSQ15046 597 aaKnown RBP12.02□□□□□ -0.49
NECAP1-216ENST00000639167 WWC2Q6AWC2 1192 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 FBXO38Q6PIJ6 1188 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 HEATR3Q7Z4Q2 680 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 ZNF804AQ7Z570 1209 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 ZNF444Q8N0Y2 327 aaPredicted RBP12.02□□□□□ -0.49
NECAP1-216ENST00000639167 USP21Q9UK80 565 aa12.02□□□□□ -0.49
NECAP1-216ENST00000639167 SBF2Q86WG5 1849 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 CCDC194A0A1B0GVG4 234 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 PP2D1A8MPX8 630 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 CYTH3O43739 400 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 TUBB4AP04350 444 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 RBL2Q08999 1139 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 INF2Q27J81 1249 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 CDKAL1Q5VV42 579 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 CREBRFQ8IUR6 639 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 AMOTL1Q8IY63 956 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 C4orf32Q8N8J7 132 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 MAPK8IP1Q9UQF2 711 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 SOWAHDA6NJG2 315 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 AKR1B15C9JRZ8 316 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-216ENST00000639167 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-216ENST00000639167 RASA1P20936 1047 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 CCT6AP40227 531 aaKnown RBP12.01□□□□□ -0.49
NECAP1-216ENST00000639167 BTDP43251 543 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 GSTO1P78417 241 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 PRR5LQ6MZQ0 368 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 SMAP1Q8IYB5 467 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-216ENST00000639167 IGSF22Q8N9C0 903 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 PLIN2Q99541 437 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 RTFDC1Q9BY42 306 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-216ENST00000639167 TMEM60Q9H2L4 133 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 ADD3Q9UEY8 706 aaKnown RBP12.01□□□□□ -0.49
NECAP1-216ENST00000639167 PCDHA6Q9UN73 950 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 PCDHA8Q9Y5H6 950 aa12.01□□□□□ -0.49
NECAP1-216ENST00000639167 UFL1O94874 794 aa12□□□□□ -0.49
NECAP1-216ENST00000639167 GNG11P61952 73 aa12□□□□□ -0.49
NECAP1-216ENST00000639167 CT47A1Q5JQC4 288 aaPredicted RBP12□□□□□ -0.49
NECAP1-216ENST00000639167 ANKS1AQ92625 1134 aa12□□□□□ -0.49
NECAP1-216ENST00000639167 RPGRQ92834 1020 aaKnown RBP12□□□□□ -0.49
NECAP1-216ENST00000639167 WDR24Q96S15 920 aa12□□□□□ -0.49
NECAP1-216ENST00000639167 FEZ1Q99689 392 aa12□□□□□ -0.49
NECAP1-216ENST00000639167 GDAQ9Y2T3 454 aa12□□□□□ -0.49
NECAP1-216ENST00000639167 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
NECAP1-216ENST00000639167 LDHCP07864 332 aa11.99□□□□□ -0.49
NECAP1-216ENST00000639167 LONP1P36776 959 aaKnown RBP11.99□□□□□ -0.49
NECAP1-216ENST00000639167 STAT6P42226 847 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms