RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 COL5A3P25940 1745 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-209ENST00000638409 PRSS47A8MTI9 375 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 SNAP47Q5SQN1 464 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 TJP1Q07157 1748 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 QSER1Q2KHR3 1735 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 TIMM44O43615 452 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 ZNF853P0CG23 659 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 MCM4P33991 863 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 MMP16P51512 607 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 RHOBTB2Q9BYZ6 727 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 KCNG1Q9UIX4 513 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 CCNL1Q9UK58 526 aaPredicted RBP9.29□□□□□ -0.92
SCARB2-209ENST00000638409 CCDC163A0A0D9SF12 145 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 CHL1O00533 1208 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 TCEA3O75764 348 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 FXNQ16595 210 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 RUFY4Q6ZNE9 571 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 FERD3LQ96RJ6 166 aa9.29□□□□□ -0.92
SCARB2-209ENST00000638409 THUMPD2Q9BTF0 503 aaKnown RBP9.29□□□□□ -0.92
SCARB2-209ENST00000638409 IL16Q14005 1332 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 HEG1Q9ULI3 1381 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 COL6A1P12109 1028 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 SMTNP53814 917 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 SLC39A6Q13433 755 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 CAMK2GQ13555 558 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-209ENST00000638409 MORC3Q14149 939 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 L1TD1Q5T7N2 865 aaKnown RBP9.28□□□□□ -0.92
SCARB2-209ENST00000638409 WWC2Q6AWC2 1192 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 CNNM4Q6P4Q7 775 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 WDR63Q8IWG1 891 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 SUGP1Q8IWZ8 645 aaKnown RBP9.28□□□□□ -0.92
SCARB2-209ENST00000638409 TTC5Q8N0Z6 440 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 KLRG1Q96E93 195 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 ZFYVE28Q9HCC9 887 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 C4BP0C0L5 1744 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 CELA3AP09093 270 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 GSTT1P30711 240 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 CREBRFQ8IUR6 639 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 CLUHP3Q96NS8 147 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 FMNL2Q96PY5 1086 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 FAM50BQ9Y247 325 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 ZNF521Q96K83 1311 aa9.28□□□□□ -0.92
SCARB2-209ENST00000638409 RRM1P23921 792 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 L1CAMP32004 1257 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 POU5F1Q01860 360 aaKnown RBP9.27□□□□□ -0.93
SCARB2-209ENST00000638409 ITPK1Q13572 414 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 TOMM20Q15388 145 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 LONRF1Q17RB8 773 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 SLITRK4Q8IW52 837 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 SYNPOQ8N3V7 929 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 ZNF511Q8NB15 262 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 GLIS3Q8NEA6 775 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 TEX13AQ9BXU3 409 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-209ENST00000638409 OBP2AQ9NY56 170 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-209ENST00000638409 HSP90AA1P07900 732 aaKnown RBP9.27□□□□□ -0.93
SCARB2-209ENST00000638409 NBPF7P0C2Y1 421 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-209ENST00000638409 MTFR1Q15390 333 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 RTN1Q16799 776 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 RC3H1Q5TC82 1133 aaKnown RBP9.27□□□□□ -0.93
SCARB2-209ENST00000638409 POTEEQ6S8J3 1075 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 COG1Q8WTW3 980 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 ZNF496Q96IT1 587 aaPredicted RBP9.27□□□□□ -0.93
SCARB2-209ENST00000638409 TMEM63CQ9P1W3 806 aa9.27□□□□□ -0.93
SCARB2-209ENST00000638409 PUF60Q9UHX1 559 aaKnown RBP9.27□□□□□ -0.93
SCARB2-209ENST00000638409 TCERG1O14776 1098 aaKnown RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 KCNQ3O43525 872 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 RNASEH2AO75792 299 aaKnown RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 PPM1FP49593 454 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 TERF1P54274 439 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 TRIP4Q15650 581 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 FOXB2Q5VYV0 432 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 TEX19Q8NA77 164 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 LEO1Q8WVC0 666 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 JPH3Q8WXH2 748 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 EREGO14944 169 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 ZSCAN20P17040 1043 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 COPB2P35606 906 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 FCGRTP55899 365 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 EIF4A1P60842 406 aaKnown RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 GNAI1P63096 354 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 HLTFQ14527 1009 aaKnown RBP eCLIP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 MSS51Q4VC12 460 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 CCDC174Q6PII3 467 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 LINC00116Q8NCU8 138 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 ZSWIM2Q8NEG5 633 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 PARD3BQ8TEW8 1205 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 ZFRQ96KR1 1074 aaKnown RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 NGRNQ9NPE2 291 aaKnown RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 USP25Q9UHP3 1055 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 TSPYL4Q9UJ04 414 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 CTDP1Q9Y5B0 961 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-209ENST00000638409 CNTNAP4Q9C0A0 1308 aa9.26□□□□□ -0.93
SCARB2-209ENST00000638409 RASSF10A6NK89 507 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 EVX2Q03828 476 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 SLC15A2Q16348 729 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 GFOD2Q3B7J2 385 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 NXNQ6DKJ4 435 aa9.25□□□□□ -0.93
SCARB2-209ENST00000638409 BNC2Q6ZN30 1099 aaPredicted RBP9.25□□□□□ -0.93
SCARB2-209ENST00000638409 ZBTB46Q86UZ6 589 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms