RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 PLIN2Q99541 437 aa9.04□□□□□ -0.96
GABRB3-225ENST00000638099 GPCPD1Q9NPB8 672 aa9.04□□□□□ -0.96
GABRB3-225ENST00000638099 CLIP2Q9UDT6 1046 aa9.04□□□□□ -0.96
GABRB3-225ENST00000638099 R3HCC1Q9Y3T6 440 aaKnown RBP9.04□□□□□ -0.96
GABRB3-225ENST00000638099 GAKO14976 1311 aa9.04□□□□□ -0.96
GABRB3-225ENST00000638099 LTBP1Q14766 1721 aa9.04□□□□□ -0.96
GABRB3-225ENST00000638099 BMP6P22004 513 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 KIF5BP33176 963 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 RCAN1P53805 252 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 SLC15A2Q16348 729 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 HS1BP3Q53T59 392 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 TTC38Q5R3I4 469 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 PLA2G4DQ86XP0 818 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 TNFRSF25Q93038 417 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.03□□□□□ -0.96
GABRB3-225ENST00000638099 ECE2O60344 883 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 GRM4Q14833 912 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 INF2Q27J81 1249 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 DNTTIP2Q5QJE6 756 aaKnown RBP9.03□□□□□ -0.96
GABRB3-225ENST00000638099 APOBEC3HQ6NTF7 200 aaKnown RBP9.03□□□□□ -0.96
GABRB3-225ENST00000638099 ZSCAN29Q8IWY8 852 aaPredicted RBP9.03□□□□□ -0.96
GABRB3-225ENST00000638099 TRMT44Q8IYL2 757 aaKnown RBP9.03□□□□□ -0.96
GABRB3-225ENST00000638099 SYMPKQ92797 1274 aaKnown RBP9.03□□□□□ -0.96
GABRB3-225ENST00000638099 PIGSQ96S52 555 aa9.03□□□□□ -0.96
GABRB3-225ENST00000638099 PP2D1A8MPX8 630 aa9.02□□□□□ -0.96
GABRB3-225ENST00000638099 SLC16A2P36021 539 aa9.02□□□□□ -0.96
GABRB3-225ENST00000638099 CRKP46108 304 aa9.02□□□□□ -0.96
GABRB3-225ENST00000638099 NLRP12P59046 1061 aa9.02□□□□□ -0.96
GABRB3-225ENST00000638099 IL17AQ16552 155 aa9.02□□□□□ -0.96
GABRB3-225ENST00000638099 DHX37Q8IY37 1157 aaKnown RBP9.02□□□□□ -0.96
GABRB3-225ENST00000638099 SMYD4Q8IYR2 804 aaPredicted RBP9.02□□□□□ -0.96
GABRB3-225ENST00000638099 BRMS1Q9HCU9 246 aa9.02□□□□□ -0.96
GABRB3-225ENST00000638099 LRRC37AA6NMS7 1700 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 ROBO3Q96MS0 1386 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 A0A0U1RQG5 324 aaPredicted RBP9.02□□□□□ -0.97
GABRB3-225ENST00000638099 SMC2O95347 1197 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 KIAA2012Q0VF49 1180 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 PPP2R5BQ15173 497 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 TTBK2Q6IQ55 1244 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 BLIDQ8IZY5 108 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 NEDD1Q8NHV4 660 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 COA7Q96BR5 231 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 FAM13BQ9NYF5 915 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 IFNKQ9P0W0 207 aa9.02□□□□□ -0.97
GABRB3-225ENST00000638099 SRPRBQ9Y5M8 271 aaKnown RBP9.02□□□□□ -0.97
GABRB3-225ENST00000638099 DDTLA6NHG4 134 aaPredicted RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 PARP1P09874 1014 aaKnown RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 PLCG2P16885 1265 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 KCTD1Q719H9 257 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 SLF2Q8IX21 1173 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 TEKT1Q969V4 418 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 FAM163AQ96GL9 167 aaPredicted RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 BLZF1Q9H2G9 400 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 PALM3A6NDB9 673 aaPredicted RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 ZNF500O60304 480 aaPredicted RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 GDF11O95390 407 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 TAL1P17542 331 aaPredicted RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 NAPAP54920 295 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 GOLGA8FQ08AF8 430 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 GOLGA8DPQ0D2H9 430 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 NCAPHQ15003 741 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 POSTNQ15063 836 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 KLHL10Q6JEL2 608 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 CACTINQ8WUQ7 758 aaKnown RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 XPO4Q9C0E2 1151 aaKnown RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 TMEM60Q9H2L4 133 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 TDRD3Q9H7E2 651 aaKnown RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 TMEM260Q9NX78 707 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 STXBP3O00186 592 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 RAD17O75943 681 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 SHMT1P34896 483 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 SNAP25P60880 206 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 MDM2Q00987 491 aaPredicted RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 JAKMIP3Q5VZ66 844 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 DPF2Q92785 391 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 CAMKK2Q96RR4 588 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 NAT10Q9H0A0 1025 aaKnown RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 OSBPL5Q9H0X9 879 aaPredicted RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 DNAJC18Q9H819 358 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 BIN2Q9UBW5 565 aaPredicted RBP9.01□□□□□ -0.97
GABRB3-225ENST00000638099 SERPINB13Q9UIV8 391 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 MAN1B1Q9UKM7 699 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 PCDHA6Q9UN73 950 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 PCDHA8Q9Y5H6 950 aa9.01□□□□□ -0.97
GABRB3-225ENST00000638099 NRXN2Q9P2S2 1712 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 CCDC194A0A1B0GVG4 234 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 YDJCA8MPS7 323 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 ACTN4O43707 911 aaKnown RBP9□□□□□ -0.97
GABRB3-225ENST00000638099 STX17P56962 302 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 NOLC1Q14978 699 aaKnown RBP eCLIP9□□□□□ -0.97
GABRB3-225ENST00000638099 TMC4Q7Z404 712 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 FLAD1Q8NFF5 587 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 HSD3B7Q9H2F3 369 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 STK32BQ9NY57 414 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 MTMR4Q9NYA4 1195 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 PPP1R1BQ9UD71 204 aaPredicted RBP9□□□□□ -0.97
GABRB3-225ENST00000638099 TUBE1Q9UJT0 475 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 PCDHA4Q9UN74 947 aa9□□□□□ -0.97
GABRB3-225ENST00000638099 ZBTB12Q9Y330 459 aaPredicted RBP9□□□□□ -0.97
GABRB3-225ENST00000638099 CLRN2A0PK11 232 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms