RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 RGPD4Q7Z3J3 1758 aa21.41■■□□□ 1.02
CLN5-219ENST00000637537 AKR1B1P15121 316 aa21.41■■□□□ 1.02
CLN5-219ENST00000637537 TCP10Q12799 353 aa21.41■■□□□ 1.02
CLN5-219ENST00000637537 RASGRP4Q8TDF6 673 aa21.41■■□□□ 1.02
CLN5-219ENST00000637537 C7orf43Q8WVR3 580 aa21.41■■□□□ 1.02
CLN5-219ENST00000637537 CNKSR1Q969H4 720 aa21.41■■□□□ 1.02
CLN5-219ENST00000637537 PALM3A6NDB9 673 aaPredicted RBP21.4■■□□□ 1.02
CLN5-219ENST00000637537 KLRF2D3W0D1 207 aa21.4■■□□□ 1.02
CLN5-219ENST00000637537 RIOK3O14730 519 aaKnown RBP21.4■■□□□ 1.02
CLN5-219ENST00000637537 FOXN1O15353 648 aa21.4■■□□□ 1.02
CLN5-219ENST00000637537 GABPAQ06546 454 aa21.4■■□□□ 1.02
CLN5-219ENST00000637537 HHIPL2Q6UWX4 724 aa21.4■■□□□ 1.02
CLN5-219ENST00000637537 PDILTQ8N807 584 aa21.4■■□□□ 1.02
CLN5-219ENST00000637537 CSRNP2Q9H175 543 aa21.4■■□□□ 1.02
CLN5-219ENST00000637537 SPDYE4A6NLX3 237 aa21.4■■□□□ 1.02
CLN5-219ENST00000637537 DACT2Q5SW24 774 aa21.4■■□□□ 1.02
CLN5-219ENST00000637537 DHX40Q8IX18 779 aaKnown RBP21.4■■□□□ 1.02
CLN5-219ENST00000637537 OSBPL5Q9H0X9 879 aaPredicted RBP21.4■■□□□ 1.02
CLN5-219ENST00000637537 QSER1Q2KHR3 1735 aa21.4■■□□□ 1.02
CLN5-219ENST00000637537 NT5C2P49902 561 aa21.39■■□□□ 1.02
CLN5-219ENST00000637537 HEATR3Q7Z4Q2 680 aa21.39■■□□□ 1.02
CLN5-219ENST00000637537 TRIM5Q9C035 493 aa21.39■■□□□ 1.02
CLN5-219ENST00000637537 SERPINB13Q9UIV8 391 aa21.39■■□□□ 1.02
CLN5-219ENST00000637537 SRPRBQ9Y5M8 271 aaKnown RBP21.39■■□□□ 1.02
CLN5-219ENST00000637537 FAM237AA0A1B0GTK4 181 aa21.39■■□□□ 1.01
CLN5-219ENST00000637537 ZRSR1Q15695 479 aaKnown RBP21.39■■□□□ 1.01
CLN5-219ENST00000637537 STRIP1Q5VSL9 837 aa21.39■■□□□ 1.01
CLN5-219ENST00000637537 WWC2Q6AWC2 1192 aa21.39■■□□□ 1.01
CLN5-219ENST00000637537 METTL16Q86W50 562 aaKnown RBP21.39■■□□□ 1.01
CLN5-219ENST00000637537 HOMER1Q86YM7 354 aa21.39■■□□□ 1.01
CLN5-219ENST00000637537 LRRC47Q8N1G4 583 aaKnown RBP21.39■■□□□ 1.01
CLN5-219ENST00000637537 AOPEPQ8N6M6 819 aa21.39■■□□□ 1.01
CLN5-219ENST00000637537 VAT1LQ9HCJ6 419 aa21.39■■□□□ 1.01
CLN5-219ENST00000637537 CEP131Q9UPN4 1083 aa21.39■■□□□ 1.01
CLN5-219ENST00000637537 FAM196BA6NMK8 535 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 USP17L5A8MUK1 530 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 BECN2A8MW95 431 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 GOLGA6L19H0YKK7 550 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 POLR2DO15514 142 aaKnown RBP21.38■■□□□ 1.01
CLN5-219ENST00000637537 CNNM3Q8NE01 707 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 FEZ1Q99689 392 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 KCNF1Q9H3M0 494 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 CAVIN2O95810 425 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 TPM3P06753 285 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 TTC38Q5R3I4 469 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 CEP57L1Q8IYX8 460 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 TIGD1Q96MW7 591 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 UBA5Q9GZZ9 404 aa21.38■■□□□ 1.01
CLN5-219ENST00000637537 PARP1P09874 1014 aaKnown RBP21.37■■□□□ 1.01
CLN5-219ENST00000637537 GNAQP50148 359 aa21.37■■□□□ 1.01
CLN5-219ENST00000637537 FRMPD2Q68DX3 1309 aaPredicted RBP21.37■■□□□ 1.01
CLN5-219ENST00000637537 KRBA2Q6ZNG9 492 aa21.37■■□□□ 1.01
CLN5-219ENST00000637537 FOXP4Q8IVH2 680 aaPredicted RBP21.37■■□□□ 1.01
CLN5-219ENST00000637537 TOP1P11387 765 aaKnown RBP21.37■■□□□ 1.01
CLN5-219ENST00000637537 EPSTI1Q96J88 318 aa21.37■■□□□ 1.01
CLN5-219ENST00000637537 ZDHHC15Q96MV8 337 aa21.37■■□□□ 1.01
CLN5-219ENST00000637537 MTMR4Q9NYA4 1195 aa21.37■■□□□ 1.01
CLN5-219ENST00000637537 PYCARDQ9ULZ3 195 aa21.37■■□□□ 1.01
CLN5-219ENST00000637537 MCM7P33993 719 aa21.36■■□□□ 1.01
CLN5-219ENST00000637537 SHMT1P34896 483 aa21.36■■□□□ 1.01
CLN5-219ENST00000637537 PTGDRQ13258 359 aa21.36■■□□□ 1.01
CLN5-219ENST00000637537 BLIDQ8IZY5 108 aa21.36■■□□□ 1.01
CLN5-219ENST00000637537 GRAMD1CQ8IYS0 662 aa21.36■■□□□ 1.01
CLN5-219ENST00000637537 MYH8P13535 1937 aa21.36■■□□□ 1.01
CLN5-219ENST00000637537 MPHOSPH10O00566 681 aaKnown RBP21.35■■□□□ 1.01
CLN5-219ENST00000637537 SHROOM1Q2M3G4 852 aaPredicted RBP21.35■■□□□ 1.01
CLN5-219ENST00000637537 CLIP2Q9UDT6 1046 aa21.35■■□□□ 1.01
CLN5-219ENST00000637537 SERTAD1Q9UHV2 236 aa21.35■■□□□ 1.01
CLN5-219ENST00000637537 YDJCA8MPS7 323 aa21.35■■□□□ 1.01
CLN5-219ENST00000637537 PPIP5K2O43314 1243 aa21.35■■□□□ 1.01
CLN5-219ENST00000637537 TAF3Q5VWG9 929 aa21.35■■□□□ 1.01
CLN5-219ENST00000637537 PCDHA4Q9UN74 947 aa21.35■■□□□ 1.01
CLN5-219ENST00000637537 VWA3AA6NCI4 1184 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 DDTLA6NHG4 134 aaPredicted RBP21.34■■□□□ 1.01
CLN5-219ENST00000637537 STXBP3O00186 592 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 ZNF75DP51815 510 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 A0A087X0B3 334 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 PDHBP11177 359 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 NLRP12P59046 1061 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 ATP2B2Q01814 1243 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 PLA2G4DQ86XP0 818 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 NAT10Q9H0A0 1025 aaKnown RBP21.34■■□□□ 1.01
CLN5-219ENST00000637537 DNAJC18Q9H819 358 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 BARHL2Q9NY43 387 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 PCDHA5Q9Y5H7 936 aa21.34■■□□□ 1.01
CLN5-219ENST00000637537 PRR29P0C7W0 189 aa21.33■■□□□ 1.01
CLN5-219ENST00000637537 CALML3P27482 149 aa21.33■■□□□ 1.01
CLN5-219ENST00000637537 NOVP48745 357 aa21.33■■□□□ 1.01
CLN5-219ENST00000637537 ZSCAN29Q8IWY8 852 aaPredicted RBP21.33■■□□□ 1.01
CLN5-219ENST00000637537 DRC7Q8IY82 874 aa21.33■■□□□ 1.01
CLN5-219ENST00000637537 ZNF579Q8NAF0 562 aaKnown RBP21.33■■□□□ 1.01
CLN5-219ENST00000637537 PIGSQ96S52 555 aa21.33■■□□□ 1.01
CLN5-219ENST00000637537 OGFRQ9NZT2 677 aa21.33■■□□□ 1.01
CLN5-219ENST00000637537 FAM198AQ9UFP1 575 aa21.33■■□□□ 1.01
CLN5-219ENST00000637537 NRBP1Q9UHY1 535 aa21.33■■□□□ 1.01
CLN5-219ENST00000637537 TUBE1Q9UJT0 475 aa21.33■■□□□ 1.01
CLN5-219ENST00000637537 HLA-DOAP06340 250 aa21.33■■□□□ 1
CLN5-219ENST00000637537 SF3B2Q13435 895 aaKnown RBP21.33■■□□□ 1
CLN5-219ENST00000637537 SYCP1Q15431 976 aa21.33■■□□□ 1
CLN5-219ENST00000637537 SYMPKQ92797 1274 aaKnown RBP21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms