RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	VEGFB	P49765	207 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	ALDH5A1	P51649	535 aa	Predicted RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	PSMC1	P62191	440 aa	Known RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	GABRE	P78334	506 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	OCRL	Q01968	901 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	RHD	Q02161	417 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	APBA1	Q02410	837 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	PPP2R3A	Q06190	1150 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	TRIM14	Q14142	442 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	PSMD6	Q15008	389 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	LRRC14	Q15048	493 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	PCBP1	Q15365	356 aa	Known RBP eCLIP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	ABCB5	Q2M3G0	1257 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	SV2C	Q496J9	727 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	TTC31	Q49AM3	519 aa	Predicted RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	VPS53	Q5VIR6	699 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	ARMC3	Q5W041	872 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	INTS3	Q68E01	1043 aa	Known RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	TLDC1	Q6P9B6	456 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	C16orf54	Q6UWD8	224 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	RUFY4	Q6ZNE9	571 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	OTOP3	Q7RTS5	596 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	RPAIN	Q86UA6	219 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	C11orf74	Q86VG3	221 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	C1orf127	Q8N9H9	656 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	LSM14A	Q8ND56	463 aa	Known RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	DEPTOR	Q8TB45	409 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	COG1	Q8WTW3	980 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	ZDHHC1	Q8WTX9	485 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	BTN2A2	Q8WVV5	523 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	CCDC47	Q96A33	483 aa	Known RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	FERMT2	Q96AC1	680 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	PLD4	Q96BZ4	506 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	TMEM87B	Q96K49	555 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	LRGUK	Q96M69	825 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	NECAB3	Q96P71	396 aa	Predicted RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	AARSD1	Q9BTE6	412 aa	Known RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	LSM14B	Q9BX40	385 aa	Known RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	SEZ6L	Q9BYH1	1024 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	RNF38	Q9H0F5	515 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	OSBPL5	Q9H0X9	879 aa	Predicted RBP	3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	CHRD	Q9H2X0	955 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	TSPY26P	Q9H489	355 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	OSGEP	Q9NPF4	335 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	RAB6B	Q9NRW1	208 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	SMC4	Q9NTJ3	1288 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	DZANK1	Q9NVP4	752 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	SAGE1	Q9NXZ1	904 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	PDP2	Q9P2J9	529 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	CYP8B1	Q9UNU6	501 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	ZNF652	Q9Y2D9	606 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	PTPN22	Q9Y2R2	807 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	PCDHB14	Q9Y5E9	798 aa		3.07	□□□□□ -1.92
GABRB3-223	ENST00000637293	GTPBP10	A4D1E9	387 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	PHF20L1	A8MW92	1017 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ENC1	O14682	589 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	PLOD3	O60568	738 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	OFD1	O75665	1012 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ZBED1	O96006	694 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	HRG	P04196	525 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	IFIT1	P09914	478 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	JMJD7	P0C870	316 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	FGFR1	P11362	822 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	CAPN3	P20807	821 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	AKAP5	P24588	427 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	INPP5B	P32019	993 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	KRT9	P35527	623 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	CHKA	P35790	457 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ECE1	P42892	770 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	TM4SF4	P48230	202 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ZNF131	P52739	623 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	KRT83	P78385	493 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ZBED6	P86452	979 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	PLIN5	Q00G26	463 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	SLC7A5	Q01650	507 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	PFKP	Q01813	784 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	TNFAIP2	Q03169	654 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	G3BP1	Q13283	466 aa	Known RBP eCLIP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	KLF1	Q13351	362 aa	Predicted RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	DCTN1	Q14203	1278 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	SMC1A	Q14683	1233 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	TERF2	Q15554	542 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	TRIP4	Q15650	581 aa	Predicted RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	BBS9	Q3SYG4	887 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	IFIT1B	Q5T764	474 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	FOXB2	Q5VYV0	432 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	HEATR6	Q6AI08	1181 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	SCARA3	Q6AZY7	606 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	CYB5RL	Q6IPT4	315 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	RETSAT	Q6NUM9	610 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	TMEM214	Q6NUQ4	689 aa	Known RBP	3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	KIAA1211L	Q6NV74	962 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	SWSAP1	Q6NVH7	229 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	FAM180B	Q6P0A1	224 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	IGF2-AS	Q6U949	168 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	UBE2Q1	Q7Z7E8	422 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	NLRP13	Q86W25	1043 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	SLFN12	Q8IYM2	578 aa		3.06	□□□□□ -1.92
GABRB3-223	ENST00000637293	ZNF784	Q8NCA9	323 aa	Predicted RBP	3.06	□□□□□ -1.92

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