RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 STK36Q9NRP7 1315 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 UBE2Q2LH0YL09 131 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 KIF3CO14782 793 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 JAK2O60674 1132 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 BMP3P12645 472 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 FDPSP14324 419 aaKnown RBP15.54■□□□□ 0.08
LINC00643-207ENST00000637212 HSPA6P17066 643 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 AKAP17AQ02040 695 aaKnown RBP15.54■□□□□ 0.08
LINC00643-207ENST00000637212 SPP2Q13103 211 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 ERO1BQ86YB8 467 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 STAG2Q8N3U4 1231 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 SMC1BQ8NDV3 1235 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 SPZ1Q9BXG8 430 aa15.54■□□□□ 0.08
LINC00643-207ENST00000637212 GBA2Q9HCG7 927 aaPredicted RBP15.54■□□□□ 0.08
LINC00643-207ENST00000637212 SPDYE5A6NIY4 337 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 CXCL11O14625 94 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 CELF2O95319 508 aaKnown RBP15.53■□□□□ 0.08
LINC00643-207ENST00000637212 PLEKHA8P1O95397 391 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 DEXIO95424 95 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 NUCB2P80303 420 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 SH3D19Q5HYK7 790 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 BTNL9Q6UXG8 535 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 SLC10A4Q96EP9 437 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 DDX11Q96FC9 970 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 FEZ1Q99689 392 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 SLC26A6Q9BXS9 759 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 RIOX1Q9H6W3 641 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 CHMP5Q9NZZ3 219 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 MTMR7Q9Y216 660 aa15.53■□□□□ 0.08
LINC00643-207ENST00000637212 V9GY48 417 aaPredicted RBP15.53■□□□□ 0.08
LINC00643-207ENST00000637212 GOLGA8HP0CJ92 632 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 CCDC96Q2M329 555 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 CST9Q5W186 159 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 LARP1BQ659C4 914 aaKnown RBP15.52■□□□□ 0.08
LINC00643-207ENST00000637212 MOB2Q70IA6 237 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 FAM177A1Q8N128 213 aaPredicted RBP15.52■□□□□ 0.08
LINC00643-207ENST00000637212 CHURC1Q8WUH1 139 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 PHKBQ93100 1093 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 C12orf42Q96LP6 360 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 ZNF408Q9H9D4 720 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 GPCPD1Q9NPB8 672 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 EMILIN3Q9NT22 766 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.52■□□□□ 0.08
LINC00643-207ENST00000637212 FEM1BQ9UK73 627 aa15.52■□□□□ 0.08
LINC00643-207ENST00000637212 GREB1LQ9C091 1923 aaPredicted RBP15.51■□□□□ 0.07
LINC00643-207ENST00000637212 WDR46O15213 610 aaKnown RBP15.51■□□□□ 0.07
LINC00643-207ENST00000637212 RAD21O60216 631 aa15.51■□□□□ 0.07
LINC00643-207ENST00000637212 TOMM70O94826 608 aa15.51■□□□□ 0.07
LINC00643-207ENST00000637212 SYT1P21579 422 aa15.51■□□□□ 0.07
LINC00643-207ENST00000637212 FMR1Q06787 632 aaKnown RBP eCLIP15.51■□□□□ 0.07
LINC00643-207ENST00000637212 PPIL2Q13356 520 aa15.51■□□□□ 0.07
LINC00643-207ENST00000637212 CCDC84Q86UT8 332 aaPredicted RBP15.51■□□□□ 0.07
LINC00643-207ENST00000637212 FAM160B2Q86V87 743 aa15.51■□□□□ 0.07
LINC00643-207ENST00000637212 CMTR1Q8N1G2 835 aaKnown RBP15.51■□□□□ 0.07
LINC00643-207ENST00000637212 CCDC82Q8N4S0 544 aa15.51■□□□□ 0.07
LINC00643-207ENST00000637212 RRP36Q96EU6 259 aaKnown RBP15.51■□□□□ 0.07
LINC00643-207ENST00000637212 ELP3Q9H9T3 547 aa15.51■□□□□ 0.07
LINC00643-207ENST00000637212 TMOD4Q9NZQ9 345 aa15.51■□□□□ 0.07
LINC00643-207ENST00000637212 FRMPD2Q68DX3 1309 aaPredicted RBP15.5■□□□□ 0.07
LINC00643-207ENST00000637212 PASKQ96RG2 1323 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 TRIM75PA6NK02 468 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 TMEM232C9JQI7 657 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 CYTH3O43739 400 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 FSTL1Q12841 308 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 MTMR2Q13614 643 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 KIAA1755Q5JYT7 1200 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 TTBK2Q6IQ55 1244 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 KCTD1Q719H9 257 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 CLMNQ96JQ2 1002 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 UBA5Q9GZZ9 404 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 KCNH4Q9UQ05 1017 aa15.5■□□□□ 0.07
LINC00643-207ENST00000637212 CNTNAP5Q8WYK1 1306 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 WDR33Q9C0J8 1336 aaKnown RBP15.49■□□□□ 0.07
LINC00643-207ENST00000637212 STX6O43752 255 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 XBP1P17861 261 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 STAT2P52630 851 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 PKN1Q16512 942 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 PFKFB3Q16875 520 aaPredicted RBP15.49■□□□□ 0.07
LINC00643-207ENST00000637212 SLC35G1Q2M3R5 365 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 FAM83BQ5T0W9 1011 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 ADGRF4Q8IZF3 695 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 SPICE1Q8N0Z3 855 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 MTMR8Q96EF0 704 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 ALG1Q9BT22 464 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 SH3GLB2Q9NR46 395 aa15.49■□□□□ 0.07
LINC00643-207ENST00000637212 PNMA6FA0A0J9YX94 578 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 FDX1P10109 184 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 SCG2P13521 617 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 TRAF1Q13077 416 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 TRIM29Q14134 588 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 ZYXQ15942 572 aaKnown RBP15.48■□□□□ 0.07
LINC00643-207ENST00000637212 SYDE2Q5VT97 1194 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 PROCA1Q8NCQ7 364 aaPredicted RBP15.48■□□□□ 0.07
LINC00643-207ENST00000637212 FBXO18Q8NFZ0 1043 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 OPTNQ96CV9 577 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 C8orf76Q96K31 380 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 NUP88Q99567 741 aaPredicted RBP15.48■□□□□ 0.07
LINC00643-207ENST00000637212 JMJD4Q9H9V9 463 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 VAT1LQ9HCJ6 419 aa15.48■□□□□ 0.07
LINC00643-207ENST00000637212 SEC63Q9UGP8 760 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms