RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 UBXN1Q04323 297 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 FERMT2Q96AC1 680 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 EIF3CQ99613 913 aaKnown RBP16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 MED4Q9NPJ6 270 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 TRMT112Q9UI30 125 aaKnown RBP16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 ASAP1Q9ULH1 1129 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 V9GY48 417 aaPredicted RBP16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
THUMPD1-206ENST00000636554 TTC26A0AVF1 554 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 LRRC10BA6NIK2 292 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 USP14P54578 494 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 PPARAQ07869 468 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 SEC23AQ15436 765 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 NPY5RQ15761 445 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 SKIDA1Q1XH10 827 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 TTC38Q5R3I4 469 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 PDXDC2PQ6P474 469 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 RWDD2AQ9UIY3 292 aa16.89■□□□□ 0.3
THUMPD1-206ENST00000636554 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
THUMPD1-206ENST00000636554 ZC3H4Q9UPT8 1303 aaKnown RBP16.89■□□□□ 0.29
THUMPD1-206ENST00000636554 PRPF6O94906 941 aaKnown RBP16.89■□□□□ 0.29
THUMPD1-206ENST00000636554 HERVK_113P62684 666 aa16.89■□□□□ 0.29
THUMPD1-206ENST00000636554 FUT2Q10981 343 aa16.89■□□□□ 0.29
THUMPD1-206ENST00000636554 HPCAL4Q9UM19 191 aa16.89■□□□□ 0.29
THUMPD1-206ENST00000636554 ARAP2Q8WZ64 1704 aa16.89■□□□□ 0.29
THUMPD1-206ENST00000636554 ADAMTS3O15072 1205 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 MYBL2P10244 700 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 ADGRA1Q86SQ6 560 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 PACS2Q86VP3 889 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 XBP1P17861 261 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 ATP2C1P98194 919 aaPredicted RBP16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 NKX1-1Q15270 411 aaPredicted RBP16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 IL17AQ16552 155 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 ENAHQ8N8S7 591 aaPredicted RBP16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 AFAP1L1Q8TED9 768 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 TNFRSF25Q93038 417 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 HINFPQ9BQA5 517 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 ACBD3Q9H3P7 528 aa16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.88■□□□□ 0.29
THUMPD1-206ENST00000636554 PSMD14O00487 310 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 PES1O00541 588 aaKnown RBP16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 TRIM14Q14142 442 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 CERS3Q8IU89 383 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 TMTC2Q8N394 836 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 CYP2D7A0A087X1C5 515 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 ATF3P18847 181 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 PRCPP42785 496 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 AARSP49588 968 aaKnown RBP eCLIP16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 BCAMP50895 628 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 PMS1P54277 932 aaKnown RBP16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 CCDC122Q5T0U0 273 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 IRF2BP1Q8IU81 584 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 TMOD3Q9NYL9 352 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 IQSEC3Q9UPP2 1182 aaPredicted RBP16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 PNPLA7Q6ZV29 1317 aa16.87■□□□□ 0.29
THUMPD1-206ENST00000636554 ZNF185O15231 689 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 MCM7P33993 719 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 SPAG1Q07617 926 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 WDR59Q6PJI9 974 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 SAR1BQ9Y6B6 198 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 PLCH1Q4KWH8 1693 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 SOS2Q07890 1332 aaPredicted RBP16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 LRP5O75197 1615 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 TUBBP07437 444 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 SLC5A1P13866 664 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 MAGEA9P43362 315 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 RCAN1P53805 252 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 PIK3AP1Q6ZUJ8 805 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 ANKRD20A12PQ8NF67 263 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 RNF41Q9H4P4 317 aaPredicted RBP16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 EFCC1Q9HA90 598 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 RTL9Q8NET4 1388 aa16.86■□□□□ 0.29
THUMPD1-206ENST00000636554 RCCD1A6NED2 376 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 GTPBP6O43824 516 aaPredicted RBP16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 PDE8AO60658 829 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 PARP1P09874 1014 aaKnown RBP16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 GGCXP38435 758 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 ZNF658Q5TYW1 1059 aaPredicted RBP16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 EEF2KMTQ96G04 330 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 HAUS4Q9H6D7 363 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 VIPAS39Q9H9C1 493 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 PRDM11Q9NQV5 511 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 BAZ2AQ9UIF9 1905 aaKnown RBP16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 RPN1P04843 607 aaKnown RBP16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 IL2RBP14784 551 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 GNAT2P19087 354 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 GOLGA6L1Q8N7Z2 621 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 OR8K1Q8NGG5 319 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 COG1Q8WTW3 980 aa16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 GNL3LQ9NVN8 582 aaKnown RBP16.85■□□□□ 0.29
THUMPD1-206ENST00000636554 PDE2AO00408 941 aaPredicted RBP16.84■□□□□ 0.29
THUMPD1-206ENST00000636554 PRPF3O43395 683 aaKnown RBP16.84■□□□□ 0.29
THUMPD1-206ENST00000636554 VEGFAP15692 232 aaPredicted RBP16.84■□□□□ 0.29
THUMPD1-206ENST00000636554 MB21D1Q8N884 522 aa16.84■□□□□ 0.29
THUMPD1-206ENST00000636554 ESR2Q92731 530 aa16.84■□□□□ 0.29
THUMPD1-206ENST00000636554 JAKMIP2Q96AA8 810 aa16.84■□□□□ 0.29
THUMPD1-206ENST00000636554 DNAJC7Q99615 494 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms