RNA–Protein interactions for RNA: ENST00000636473.1

CACNA1A-226, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-226ENST00000636473 CCDC96Q2M329 555 aa19.63■□□□□ 0.73
CACNA1A-226ENST00000636473 CCDC144CPQ8IYA2 1237 aa19.63■□□□□ 0.73
CACNA1A-226ENST00000636473 DCAF4Q8WV16 495 aa19.63■□□□□ 0.73
CACNA1A-226ENST00000636473 RPAP3Q9H6T3 665 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-226ENST00000636473 FRMPD2Q68DX3 1309 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-226ENST00000636473 GOLGA8BA8MQT2 603 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 ZBTB43O43298 467 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 SNHG28P0DPA3 235 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 BMP3P12645 472 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 EVCP57679 992 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 GPAT2Q6NUI2 795 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 KCTD1Q719H9 257 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 TPCN1Q9ULQ1 816 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 AGTPBP1Q9UPW5 1226 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 TESPA1A2RU30 521 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 CD2BP2O95400 341 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 GOLGA8HP0CJ92 632 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 PTPN18Q99952 460 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 TANGO6Q9C0B7 1094 aa19.62■□□□□ 0.73
CACNA1A-226ENST00000636473 BTBD19C9JJ37 291 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 PARP1P09874 1014 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 CALM1P0DP23 149 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 CALM2P0DP24 149 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 CALM3P0DP25 149 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 ZNF543Q08ER8 600 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 SREBF2Q12772 1141 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 GRM4Q14833 912 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 IL27Q8NEV9 243 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 GPCPD1Q9NPB8 672 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 HPS5Q9UPZ3 1129 aa19.61■□□□□ 0.73
CACNA1A-226ENST00000636473 GOLGA8AA7E2F4 631 aa19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 TMEM232C9JQI7 657 aa19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 INHBEP58166 350 aa19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 STK3Q13188 491 aa19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 FAM43AQ8N2R8 423 aa19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 STAG2Q8N3U4 1231 aa19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 FANCBQ8NB91 859 aa19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 CTCFLQ8NI51 663 aaPredicted RBP19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 ZNF274Q96GC6 653 aaPredicted RBP19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
CACNA1A-226ENST00000636473 USP17L15C9J2P7 530 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 USP17L13C9JLJ4 530 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 USP17L11C9JVI0 530 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 USP17L18D6R9N7 530 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 USP17L22D6RA61 530 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 USP17L17D6RBQ6 530 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 USP17L19D6RCP7 530 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 USP17L20D6RJB6 530 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 IGF2BP3O00425 579 aaKnown RBP eCLIP19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 METAP2P50579 478 aaKnown RBP eCLIP19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 USP17L24Q0WX57 530 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 ASPRV1Q53RT3 343 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 GPATCH4Q5T3I0 446 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 TTBK2Q6IQ55 1244 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 ANKRD23Q86SG2 305 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 MAP3K14Q99558 947 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 LIMCH1Q9UPQ0 1083 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 PDHXO00330 501 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 LARGE1O95461 756 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 HOXA7P31268 230 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 KIF5BP33176 963 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 TM4SF4P48230 202 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 RCAN1P53805 252 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 CCT2P78371 535 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 IKQ13123 557 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 PABPC4Q13310 644 aaKnown RBP eCLIP19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 SAMD1Q6SPF0 538 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 CATSPERGQ6ZRH7 1159 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 FBXO28Q9NVF7 368 aa19.59■□□□□ 0.73
CACNA1A-226ENST00000636473 PALM3A6NDB9 673 aaPredicted RBP19.58■□□□□ 0.72
CACNA1A-226ENST00000636473 FLOT1O75955 427 aa19.58■□□□□ 0.72
CACNA1A-226ENST00000636473 SLC16A2P36021 539 aa19.58■□□□□ 0.72
CACNA1A-226ENST00000636473 MAP2K2P36507 400 aa19.58■□□□□ 0.72
CACNA1A-226ENST00000636473 ME3Q16798 604 aa19.58■□□□□ 0.72
CACNA1A-226ENST00000636473 RTN1Q16799 776 aa19.58■□□□□ 0.72
CACNA1A-226ENST00000636473 IFNL1Q8IU54 200 aa19.58■□□□□ 0.72
CACNA1A-226ENST00000636473 CPVLQ9H3G5 476 aa19.58■□□□□ 0.72
CACNA1A-226ENST00000636473 KLRF2D3W0D1 207 aa19.57■□□□□ 0.72
CACNA1A-226ENST00000636473 CDC27P30260 824 aa19.57■□□□□ 0.72
CACNA1A-226ENST00000636473 STAT2P52630 851 aa19.57■□□□□ 0.72
CACNA1A-226ENST00000636473 IRX3P78415 501 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-226ENST00000636473 UBA5Q9GZZ9 404 aa19.57■□□□□ 0.72
CACNA1A-226ENST00000636473 ASCC2Q9H1I8 757 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-226ENST00000636473 SLKQ9H2G2 1235 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-226ENST00000636473 NCOA5Q9HCD5 579 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-226ENST00000636473 FEM1BQ9UK73 627 aa19.57■□□□□ 0.72
CACNA1A-226ENST00000636473 OSBPP22059 807 aa19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 OTUD7BQ6GQQ9 843 aa19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 CHURC1Q8WUH1 139 aa19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 FAM217BQ9NTX9 383 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 RBM28Q9NW13 759 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 SLC45A1Q9Y2W3 748 aa19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 NID2Q14112 1375 aa19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 PFKFB2O60825 505 aa19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 PLEKHA8P1O95397 391 aa19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 ADD1P35611 737 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 MCM2P49736 904 aa19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 COG2Q14746 738 aa19.56■□□□□ 0.72
CACNA1A-226ENST00000636473 FAM160B2Q86V87 743 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms