RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PUM3Q15397 648 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 TNS3Q68CZ2 1445 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 CMTR1Q8N1G2 835 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 SPATA5Q8NB90 893 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 ZCRB1Q8TBF4 217 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 CHP1Q99653 195 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 GREM2Q9H772 168 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 XDHP47989 1333 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 ANO9A1A5B4 782 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 PRPF3O43395 683 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 ATP2C1P98194 919 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 E2F4Q16254 413 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 CCDC122Q5T0U0 273 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 RUBCNQ92622 972 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 MYH8P13535 1937 aa16.65■□□□□ 0.26
CACNA1A-220ENST00000635988 TNS2Q63HR2 1409 aa16.64■□□□□ 0.26
CACNA1A-220ENST00000635988 IRX3P78415 501 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 TTC38Q5R3I4 469 aa16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 FAM76AQ8TAV0 307 aa16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 IPO7O95373 1038 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 SF3B2Q13435 895 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 CAPN11Q9UMQ6 739 aa16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 SLC4A4Q9Y6R1 1079 aa16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 ZC3H4Q9UPT8 1303 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 PAPPAQ13219 1627 aa16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 DISP2A7MBM2 1401 aa16.64■□□□□ 0.25
CACNA1A-220ENST00000635988 TTC26A0AVF1 554 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 ATP1A1P05023 1023 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 EEF1GP26641 437 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 CYLC1P35663 651 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 TRAPPC10P48553 1259 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 PDXDC2PQ6P474 469 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 KIAA1328Q86T90 577 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 TADA2BQ86TJ2 420 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 MB21D1Q8N884 522 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 RBM28Q9NW13 759 aaKnown RBP16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 FAM205CA6NFA0 338 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 LGALS16A8MUM7 142 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 SEMA3FQ13275 785 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 PKN1Q16512 942 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 CCNI2Q6ZMN8 369 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 GBP6Q6ZN66 633 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 ESR2Q92731 530 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 JAKMIP2Q96AA8 810 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 MROH5Q6ZUA9 1318 aa16.63■□□□□ 0.25
CACNA1A-220ENST00000635988 ENC1O14682 589 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 PTGDRQ13258 359 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 ZNF174Q15697 407 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 CHRNA2Q15822 529 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 GIGYF2Q6Y7W6 1299 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 CAGE1Q8TC20 777 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 BLZF1Q9H2G9 400 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 DEF6Q9H4E7 631 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 TRIM10Q9UDY6 481 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 ZNF330Q9Y3S2 320 aaPredicted RBP16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 RPN1P04843 607 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 SLC5A1P13866 664 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 GGCXP38435 758 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 HERVK_113P62684 666 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 SEC23AQ15436 765 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 EARS2Q5JPH6 523 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 SUGP1Q8IWZ8 645 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 AMOTL1Q8IY63 956 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 CCDC170Q8IYT3 715 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 ZBTB9Q96C00 473 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 NUP58Q9BVL2 599 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 SELENOOQ9BVL4 669 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 ZNHIT6Q9NWK9 470 aaKnown RBP16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 HDAC6Q9UBN7 1215 aa16.62■□□□□ 0.25
CACNA1A-220ENST00000635988 GOLGA6CA6NDK9 693 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 A6NNZ2 444 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 GOLGA6DP0CG33 693 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 CALM1P0DP23 149 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 CALM2P0DP24 149 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 CALM3P0DP25 149 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 FGFR2P21802 821 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 MEA1Q16626 185 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 TUBB8Q3ZCM7 444 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 TNFRSF25Q93038 417 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 GOLGA6AQ9NYA3 693 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 FAM184BQ9ULE4 1060 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 TNKSO95271 1327 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 GOLGA6BA6NDN3 693 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 PPARAQ07869 468 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 PPFIA1Q13136 1202 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 NLRP10Q86W26 655 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 STAMQ92783 540 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 THAP9Q9H5L6 903 aa16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
CACNA1A-220ENST00000635988 EBAG9O00559 213 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms