RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 ZNF277Q9NRM2 450 aaPredicted RBP20.56■□□□□ 0.88
CLN5-206ENST00000635915 NOL7Q9UMY1 257 aaKnown RBP20.56■□□□□ 0.88
CLN5-206ENST00000635915 IGKV6D-41A0A0C4DH26 115 aa20.55■□□□□ 0.88
CLN5-206ENST00000635915 FKBP1AP62942 108 aaKnown RBP20.55■□□□□ 0.88
CLN5-206ENST00000635915 SH3BP5LQ7L8J4 393 aa20.55■□□□□ 0.88
CLN5-206ENST00000635915 ZSCAN29Q8IWY8 852 aaPredicted RBP20.55■□□□□ 0.88
CLN5-206ENST00000635915 PLIN4Q96Q06 1357 aa20.55■□□□□ 0.88
CLN5-206ENST00000635915 STXBP3O00186 592 aa20.55■□□□□ 0.88
CLN5-206ENST00000635915 PDHBP11177 359 aa20.55■□□□□ 0.88
CLN5-206ENST00000635915 ATP2B2Q01814 1243 aa20.55■□□□□ 0.88
CLN5-206ENST00000635915 CC2D2BQ6DHV5 1058 aa20.55■□□□□ 0.88
CLN5-206ENST00000635915 METTL16Q86W50 562 aaKnown RBP20.55■□□□□ 0.88
CLN5-206ENST00000635915 TIGD1Q96MW7 591 aa20.55■□□□□ 0.88
CLN5-206ENST00000635915 ZNF830Q96NB3 372 aaPredicted RBP20.55■□□□□ 0.88
CLN5-206ENST00000635915 POLR2DO15514 142 aaKnown RBP20.54■□□□□ 0.88
CLN5-206ENST00000635915 RAD17O75943 681 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 SPC24Q8NBT2 197 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 CNNM3Q8NE01 707 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 SPZ1Q9BXG8 430 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 BARHL2Q9NY43 387 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 SWAP70Q9UH65 585 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 SERPINA10Q9UK55 444 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 PCDHA4Q9UN74 947 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 ZBTB7AO95365 584 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 CALML3P27482 149 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 MCM7P33993 719 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 PTGDRQ13258 359 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 KRBA2Q6ZNG9 492 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 DHX40Q8IX18 779 aaKnown RBP20.54■□□□□ 0.88
CLN5-206ENST00000635915 SUPT20HQ8NEM7 779 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 EPSTI1Q96J88 318 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 MRIQ9BWK5 157 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 SH3GLB2Q9NR46 395 aa20.54■□□□□ 0.88
CLN5-206ENST00000635915 CAVIN2O95810 425 aa20.53■□□□□ 0.88
CLN5-206ENST00000635915 HDLBPQ00341 1268 aaKnown RBP20.53■□□□□ 0.88
CLN5-206ENST00000635915 ZRSR1Q15695 479 aaKnown RBP20.53■□□□□ 0.88
CLN5-206ENST00000635915 CCDC93Q567U6 631 aa20.53■□□□□ 0.88
CLN5-206ENST00000635915 CEP57L1Q8IYX8 460 aa20.53■□□□□ 0.88
CLN5-206ENST00000635915 AOPEPQ8N6M6 819 aa20.53■□□□□ 0.88
CLN5-206ENST00000635915 FBXO41Q8TF61 875 aa20.53■□□□□ 0.88
CLN5-206ENST00000635915 PIGSQ96S52 555 aa20.53■□□□□ 0.88
CLN5-206ENST00000635915 LZTS2Q9BRK4 669 aa20.53■□□□□ 0.88
CLN5-206ENST00000635915 FAM13BQ9NYF5 915 aa20.53■□□□□ 0.88
CLN5-206ENST00000635915 CFAP100Q494V2 611 aa20.53■□□□□ 0.88
CLN5-206ENST00000635915 FOXP4Q8IVH2 680 aaPredicted RBP20.53■□□□□ 0.88
CLN5-206ENST00000635915 PRMT6Q96LA8 375 aaPredicted RBP20.53■□□□□ 0.88
CLN5-206ENST00000635915 COL4A5P29400 1685 aa20.52■□□□□ 0.88
CLN5-206ENST00000635915 TTLL1O95922 423 aa20.52■□□□□ 0.88
CLN5-206ENST00000635915 GRAMD1CQ8IYS0 662 aa20.52■□□□□ 0.88
CLN5-206ENST00000635915 IDI2Q9BXS1 227 aa20.52■□□□□ 0.88
CLN5-206ENST00000635915 GPCPD1Q9NPB8 672 aa20.52■□□□□ 0.88
CLN5-206ENST00000635915 SIPA1L1O43166 1804 aa20.52■□□□□ 0.88
CLN5-206ENST00000635915 GOLGA6L19H0YKK7 550 aa20.52■□□□□ 0.87
CLN5-206ENST00000635915 MSNP26038 577 aaKnown RBP20.52■□□□□ 0.87
CLN5-206ENST00000635915 LARGE2Q8N3Y3 721 aa20.52■□□□□ 0.87
CLN5-206ENST00000635915 ZNF579Q8NAF0 562 aaKnown RBP20.52■□□□□ 0.87
CLN5-206ENST00000635915 TRIM5Q9C035 493 aa20.52■□□□□ 0.87
CLN5-206ENST00000635915 SERTAD1Q9UHV2 236 aa20.52■□□□□ 0.87
CLN5-206ENST00000635915 A0A087X0B3 334 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 VWA3AA6NCI4 1184 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 BECN2A8MW95 431 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 M0R2N6 131 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 CLCN1P35523 988 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 PCDHA6Q9UN73 950 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 ZKSCAN5Q9Y2L8 839 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 PCDHA8Q9Y5H6 950 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.51■□□□□ 0.87
CLN5-206ENST00000635915 NAPAP54920 295 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 RRP36Q96EU6 259 aaKnown RBP20.51■□□□□ 0.87
CLN5-206ENST00000635915 EHD4Q9H223 541 aa20.51■□□□□ 0.87
CLN5-206ENST00000635915 CCDC148Q8NFR7 591 aa20.5■□□□□ 0.87
CLN5-206ENST00000635915 TTC12Q9H892 705 aaPredicted RBP20.5■□□□□ 0.87
CLN5-206ENST00000635915 ZBTB12Q9Y330 459 aaPredicted RBP20.5■□□□□ 0.87
CLN5-206ENST00000635915 NLRP12P59046 1061 aa20.5■□□□□ 0.87
CLN5-206ENST00000635915 ATP2C1P98194 919 aaPredicted RBP20.5■□□□□ 0.87
CLN5-206ENST00000635915 RTKN2Q8IZC4 609 aa20.5■□□□□ 0.87
CLN5-206ENST00000635915 SYMPKQ92797 1274 aaKnown RBP20.5■□□□□ 0.87
CLN5-206ENST00000635915 PI4KBQ9UBF8 816 aa20.5■□□□□ 0.87
CLN5-206ENST00000635915 TUBE1Q9UJT0 475 aa20.5■□□□□ 0.87
CLN5-206ENST00000635915 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
CLN5-206ENST00000635915 PCDHA5Q9Y5H7 936 aa20.5■□□□□ 0.87
CLN5-206ENST00000635915 CCDC194A0A1B0GVG4 234 aa20.49■□□□□ 0.87
CLN5-206ENST00000635915 PSMD14O00487 310 aa20.49■□□□□ 0.87
CLN5-206ENST00000635915 PRR29P0C7W0 189 aa20.49■□□□□ 0.87
CLN5-206ENST00000635915 MDM2Q00987 491 aaPredicted RBP20.49■□□□□ 0.87
CLN5-206ENST00000635915 INF2Q27J81 1249 aa20.49■□□□□ 0.87
CLN5-206ENST00000635915 TTBK2Q6IQ55 1244 aa20.49■□□□□ 0.87
CLN5-206ENST00000635915 DHX36Q9H2U1 1008 aaKnown RBP20.49■□□□□ 0.87
CLN5-206ENST00000635915 SEC63Q9UGP8 760 aaKnown RBP20.49■□□□□ 0.87
CLN5-206ENST00000635915 MYO3BQ8WXR4 1341 aa20.49■□□□□ 0.87
CLN5-206ENST00000635915 RAD21O60216 631 aa20.49■□□□□ 0.87
CLN5-206ENST00000635915 IL17AQ16552 155 aa20.49■□□□□ 0.87
CLN5-206ENST00000635915 MYH4Q9Y623 1939 aa20.48■□□□□ 0.87
CLN5-206ENST00000635915 SNHG28P0DPA3 235 aa20.48■□□□□ 0.87
CLN5-206ENST00000635915 TRAPPC10P48553 1259 aa20.48■□□□□ 0.87
CLN5-206ENST00000635915 ZNF75DP51815 510 aa20.48■□□□□ 0.87
CLN5-206ENST00000635915 SLC16A10Q8TF71 515 aa20.48■□□□□ 0.87
CLN5-206ENST00000635915 DHX58Q96C10 678 aa20.48■□□□□ 0.87
CLN5-206ENST00000635915 PSMD1Q99460 953 aa20.48■□□□□ 0.87
CLN5-206ENST00000635915 NAT10Q9H0A0 1025 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms