RNA–Protein interactions for RNA: ENST00000634925.1

SMARCA2-230, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-230ENST00000634925 CPVLQ9H3G5 476 aa12.99□□□□□ -0.33
SMARCA2-230ENST00000634925 SH2D4AQ9H788 454 aa12.99□□□□□ -0.33
SMARCA2-230ENST00000634925 GOPCQ9HD26 462 aa12.99□□□□□ -0.33
SMARCA2-230ENST00000634925 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
SMARCA2-230ENST00000634925 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
SMARCA2-230ENST00000634925 DAXXQ9UER7 740 aaPredicted RBP12.99□□□□□ -0.33
SMARCA2-230ENST00000634925 SMCHD1A6NHR9 2005 aa12.99□□□□□ -0.33
SMARCA2-230ENST00000634925 CCDC196A0A1B0GTZ2 297 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 UNCXA6NJT0 531 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 CPLX1O14810 134 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 IRF6O14896 467 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 KIF5BP33176 963 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 GJA5P36382 358 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 SLC1A4P43007 532 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 PPATQ06203 517 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 ZNF543Q08ER8 600 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 FUT2Q10981 343 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 PPP2R5BQ15173 497 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 TTBK2Q6IQ55 1244 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 TMTC3Q6ZXV5 915 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 SMARCC2Q8TAQ2 1214 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 DCAF4Q8WV16 495 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 PHKBQ93100 1093 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 OPTNQ96CV9 577 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 SLC10A4Q96EP9 437 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 GMCL1Q96IK5 515 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 GPCPD1Q9NPB8 672 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 LOC285556D6RIA3 1793 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 PTPDC1A2A3K4 754 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 KLRF2D3W0D1 207 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 DHX16O60231 1041 aaKnown RBP12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 BMP3P12645 472 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 IFNAR1P17181 557 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 USP14P54578 494 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 HMGCS2P54868 508 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 HUNKP57058 714 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 ASPRV1Q53RT3 343 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 FAM83BQ5T0W9 1011 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 LLPHQ9BRT6 129 aaKnown RBP12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 UBA5Q9GZZ9 404 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 RLFQ13129 1914 aa12.98□□□□□ -0.33
SMARCA2-230ENST00000634925 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
SMARCA2-230ENST00000634925 C19orf81C9J6K1 198 aa12.97□□□□□ -0.33
SMARCA2-230ENST00000634925 CYTH3O43739 400 aa12.97□□□□□ -0.33
SMARCA2-230ENST00000634925 FDPSP14324 419 aaKnown RBP12.97□□□□□ -0.33
SMARCA2-230ENST00000634925 GJB2P29033 226 aa12.97□□□□□ -0.33
SMARCA2-230ENST00000634925 PPIL2Q13356 520 aa12.97□□□□□ -0.33
SMARCA2-230ENST00000634925 GPATCH4Q5T3I0 446 aaKnown RBP12.97□□□□□ -0.33
SMARCA2-230ENST00000634925 ISY1Q9ULR0 285 aaKnown RBP12.97□□□□□ -0.33
SMARCA2-230ENST00000634925 SMC3Q9UQE7 1217 aa12.97□□□□□ -0.33
SMARCA2-230ENST00000634925 hCG_1642624A0A1W2PR95 340 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 TMEM232C9JQI7 657 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 VCAM1P19320 739 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 SLC16A2P36021 539 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 GNAQP50148 359 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 FSTL1Q12841 308 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 SH3D19Q5HYK7 790 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 CPLX2Q6PUV4 134 aaKnown RBP12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 SAPCD2Q86UD0 394 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 LPAR1Q92633 364 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 WNK4Q96J92 1243 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 SLC26A6Q9BXS9 759 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 KCNH4Q9UQ05 1017 aa12.96□□□□□ -0.33
SMARCA2-230ENST00000634925 COL11A1P12107 1806 aaPredicted RBP12.96□□□□□ -0.34
SMARCA2-230ENST00000634925 CXCL11O14625 94 aa12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 CDKL5O76039 1030 aa12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 PIBF1Q8WXW3 757 aa12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 C12orf42Q96LP6 360 aa12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 LZTS2Q9BRK4 669 aa12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 VAT1LQ9HCJ6 419 aa12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 ORC3Q9UBD5 711 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 V9GY48 417 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-230ENST00000634925 A0A0G2JLL6 359 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 WDR46O15213 610 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 PRPF3O43395 683 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 MKRN3Q13064 507 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 PRRT2Q7Z6L0 340 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 ADGRF4Q8IZF3 695 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 AIFM3Q96NN9 605 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 RIOX1Q9H6W3 641 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 FBXO28Q9NVF7 368 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 TLL2Q9Y6L7 1015 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 STK36Q9NRP7 1315 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 TMEM88BA6NKF7 163 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 SMARCA1P28370 1054 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 MOGSQ13724 837 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 PKN1Q16512 942 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 TREML2Q5T2D2 321 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 BTNL9Q6UXG8 535 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 GADL1Q6ZQY3 521 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 TRIM22Q8IYM9 498 aa12.94□□□□□ -0.34
SMARCA2-230ENST00000634925 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms