RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ISY1Q9ULR0 285 aaKnown RBP18.56■□□□□ 0.56
LINC00339-207ENST00000634712 PLIN4Q96Q06 1357 aa18.56■□□□□ 0.56
LINC00339-207ENST00000634712 CENPFP49454 3210 aa18.56■□□□□ 0.56
LINC00339-207ENST00000634712 POTEFA5A3E0 1075 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 FGRP09769 529 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 NUP88Q99567 741 aaPredicted RBP18.55■□□□□ 0.56
LINC00339-207ENST00000634712 SPATC1LQ9H0A9 340 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 CTDP1Q9Y5B0 961 aaPredicted RBP18.55■□□□□ 0.56
LINC00339-207ENST00000634712 GREB1LQ9C091 1923 aaPredicted RBP18.55■□□□□ 0.56
LINC00339-207ENST00000634712 CHMLP26374 656 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 RGS2P41220 211 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 IMMTQ16891 758 aaKnown RBP18.55■□□□□ 0.56
LINC00339-207ENST00000634712 SLFN13Q68D06 897 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 GMCL1P1Q8NEA9 526 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 RNF208Q9H0X6 261 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 FBXO28Q9NVF7 368 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 PPP1R9AQ9ULJ8 1098 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 TACC3Q9Y6A5 838 aa18.55■□□□□ 0.56
LINC00339-207ENST00000634712 RAD50Q92878 1312 aa18.54■□□□□ 0.56
LINC00339-207ENST00000634712 INHAP05111 366 aa18.54■□□□□ 0.56
LINC00339-207ENST00000634712 CCL5P13501 91 aa18.54■□□□□ 0.56
LINC00339-207ENST00000634712 MTFR1Q15390 333 aa18.54■□□□□ 0.56
LINC00339-207ENST00000634712 TRMT44Q8IYL2 757 aaKnown RBP18.54■□□□□ 0.56
LINC00339-207ENST00000634712 STAG1Q8WVM7 1258 aa18.54■□□□□ 0.56
LINC00339-207ENST00000634712 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
LINC00339-207ENST00000634712 MOV10L1Q9BXT6 1211 aaKnown RBP18.54■□□□□ 0.56
LINC00339-207ENST00000634712 IL17RBQ9NRM6 502 aa18.54■□□□□ 0.56
LINC00339-207ENST00000634712 MYH4Q9Y623 1939 aa18.54■□□□□ 0.56
LINC00339-207ENST00000634712 KIAA0100Q14667 2235 aaKnown RBP18.53■□□□□ 0.56
LINC00339-207ENST00000634712 SLC15A5A6NIM6 579 aa18.53■□□□□ 0.56
LINC00339-207ENST00000634712 NMT2O60551 498 aa18.53■□□□□ 0.56
LINC00339-207ENST00000634712 HMGCRP04035 888 aa18.53■□□□□ 0.56
LINC00339-207ENST00000634712 BMP3P12645 472 aa18.53■□□□□ 0.56
LINC00339-207ENST00000634712 XRCC5P13010 732 aaKnown RBP18.53■□□□□ 0.56
LINC00339-207ENST00000634712 EN2P19622 333 aaPredicted RBP18.53■□□□□ 0.56
LINC00339-207ENST00000634712 PTPREP23469 700 aa18.53■□□□□ 0.56
LINC00339-207ENST00000634712 NCAPG2Q86XI2 1143 aa18.53■□□□□ 0.56
LINC00339-207ENST00000634712 PRPF38AQ8NAV1 312 aaKnown RBP18.53■□□□□ 0.56
LINC00339-207ENST00000634712 ESR2Q92731 530 aa18.53■□□□□ 0.56
LINC00339-207ENST00000634712 FEM1BQ9UK73 627 aa18.53■□□□□ 0.56
LINC00339-207ENST00000634712 VWA5AO00534 786 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 STRNO43815 780 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 ZBED4O75132 1171 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 SLC25A27O95847 323 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 CENPBP07199 599 aaPredicted RBP18.52■□□□□ 0.55
LINC00339-207ENST00000634712 ERCC3P19447 782 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 SLC1A4P43007 532 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 IKQ13123 557 aaPredicted RBP18.52■□□□□ 0.55
LINC00339-207ENST00000634712 MAP2K5Q13163 448 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 TMEM132BQ14DG7 1078 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 MORN1Q5T089 497 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 TBC1D10CQ8IV04 446 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 SHCBP1Q8NEM2 672 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 NKX2-3Q8TAU0 364 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 KIFC2Q96AC6 838 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 MROH8Q9H579 483 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 TCP11L1Q9NUJ3 509 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 ADAMTS5Q9UNA0 930 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 MTMR7Q9Y216 660 aa18.52■□□□□ 0.55
LINC00339-207ENST00000634712 ZKSCAN1P17029 563 aaPredicted RBP18.51■□□□□ 0.55
LINC00339-207ENST00000634712 MCCP23508 829 aa18.51■□□□□ 0.55
LINC00339-207ENST00000634712 STAT3P40763 770 aa18.51■□□□□ 0.55
LINC00339-207ENST00000634712 NT5C2P49902 561 aa18.51■□□□□ 0.55
LINC00339-207ENST00000634712 DPP9Q86TI2 863 aa18.51■□□□□ 0.55
LINC00339-207ENST00000634712 CHURC1Q8WUH1 139 aa18.51■□□□□ 0.55
LINC00339-207ENST00000634712 CHMP4CQ96CF2 233 aa18.51■□□□□ 0.55
LINC00339-207ENST00000634712 UNC93B1Q9H1C4 597 aa18.51■□□□□ 0.55
LINC00339-207ENST00000634712 TMEM232C9JQI7 657 aa18.5■□□□□ 0.55
LINC00339-207ENST00000634712 USP6NLQ92738 828 aa18.5■□□□□ 0.55
LINC00339-207ENST00000634712 GMCL1Q96IK5 515 aa18.5■□□□□ 0.55
LINC00339-207ENST00000634712 APBA2Q99767 749 aa18.5■□□□□ 0.55
LINC00339-207ENST00000634712 NBPF3Q9H094 633 aa18.5■□□□□ 0.55
LINC00339-207ENST00000634712 IL25Q9H293 177 aa18.5■□□□□ 0.55
LINC00339-207ENST00000634712 SLC5A4Q9NY91 659 aa18.5■□□□□ 0.55
LINC00339-207ENST00000634712 RLFQ13129 1914 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 GJB1P08034 283 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 TOP1P11387 765 aaKnown RBP18.49■□□□□ 0.55
LINC00339-207ENST00000634712 COPB2P35606 906 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 SLC4A3P48751 1232 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 GRB14Q14449 540 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 CCDC178Q5BJE1 867 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 KIAA1211Q6ZU35 1233 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 IQCA1Q86XH1 822 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 TRIB2Q92519 343 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 TTC14Q96N46 770 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 KRT23Q9C075 422 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 CNNM2Q9H8M5 875 aa18.49■□□□□ 0.55
LINC00339-207ENST00000634712 SGSM2O43147 1006 aa18.48■□□□□ 0.55
LINC00339-207ENST00000634712 FCER1AP12319 257 aa18.48■□□□□ 0.55
LINC00339-207ENST00000634712 STAT2P52630 851 aa18.48■□□□□ 0.55
LINC00339-207ENST00000634712 CCDC96Q2M329 555 aa18.48■□□□□ 0.55
LINC00339-207ENST00000634712 RCSD1Q6JBY9 416 aa18.48■□□□□ 0.55
LINC00339-207ENST00000634712 FAM160B2Q86V87 743 aa18.48■□□□□ 0.55
LINC00339-207ENST00000634712 RIOX2Q8IUF8 465 aa18.48■□□□□ 0.55
LINC00339-207ENST00000634712 HMX1Q9NP08 348 aaPredicted RBP18.48■□□□□ 0.55
LINC00339-207ENST00000634712 U3KPZ7 1027 aaPredicted RBP18.48■□□□□ 0.55
LINC00339-207ENST00000634712 NEDD4P46934 1319 aa18.48■□□□□ 0.55
LINC00339-207ENST00000634712 B4E1Z4 1266 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 KDM4AO75164 1064 aa18.47■□□□□ 0.55
LINC00339-207ENST00000634712 FDX1P10109 184 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms