RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-219	ENST00000629151	ZBTB43	O43298	467 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	RAD21	O60216	631 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	PARP1	P09874	1014 aa	Known RBP	13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	PDHB	P11177	359 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	CPA1	P15085	419 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	VCAM1	P19320	739 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	AK2	P54819	239 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	KIF23	Q02241	960 aa	Predicted RBP	13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	APOA5	Q6Q788	366 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	GADL1	Q6ZQY3	521 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	FAM160B2	Q86V87	743 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	CLEC10A	Q8IUN9	316 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	FANCB	Q8NB91	859 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	TCEANC2	Q96MN5	208 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	LRRC2	Q9BYS8	371 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	FEM1B	Q9UK73	627 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	LIMCH1	Q9UPQ0	1083 aa		13.47	□□□□□ -0.25
PTPN7-219	ENST00000629151	ZNF543	Q08ER8	600 aa		13.46	□□□□□ -0.25
PTPN7-219	ENST00000629151	TOB2	Q14106	344 aa	Predicted RBP	13.46	□□□□□ -0.25
PTPN7-219	ENST00000629151	COG2	Q14746	738 aa		13.46	□□□□□ -0.25
PTPN7-219	ENST00000629151	GRM4	Q14833	912 aa		13.46	□□□□□ -0.25
PTPN7-219	ENST00000629151	ZYX	Q15942	572 aa	Known RBP	13.46	□□□□□ -0.25
PTPN7-219	ENST00000629151	CPLX2	Q6PUV4	134 aa	Known RBP	13.46	□□□□□ -0.25
PTPN7-219	ENST00000629151	PRPF38A	Q8NAV1	312 aa	Known RBP	13.46	□□□□□ -0.25
PTPN7-219	ENST00000629151	BRI3BP	Q8WY22	251 aa		13.46	□□□□□ -0.25
PTPN7-219	ENST00000629151	PALM3	A6NDB9	673 aa	Predicted RBP	13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	PDIA3	P30101	505 aa	Known RBP	13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	VEGFB	P49765	207 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	STAT2	P52630	851 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	IRX3	P78415	501 aa	Predicted RBP	13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	MKRN3	Q13064	507 aa	Known RBP	13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	TRAF1	Q13077	416 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	MOGS	Q13724	837 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	CCDC96	Q2M329	555 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	BTNL9	Q6UXG8	535 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	CATSPERG	Q6ZRH7	1159 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	IFNL1	Q8IU54	200 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	SPICE1	Q8N0Z3	855 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	NUP133	Q8WUM0	1156 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	PARK7	Q99497	189 aa	Known RBP	13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	GPHN	Q9NQX3	736 aa	Predicted RBP	13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	BRPF3	Q9ULD4	1205 aa		13.45	□□□□□ -0.26
PTPN7-219	ENST00000629151	DOCK1	Q14185	1865 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	GOLGA8B	A8MQT2	603 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	BTBD19	C9JJ37	291 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	GCLC	P48506	637 aa	Predicted RBP	13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	METAP2	P50579	478 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	APOBR	Q0VD83	1088 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	GRM1	Q13255	1194 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	COL9A3	Q14050	684 aa	Predicted RBP	13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	RTN1	Q16799	776 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	FAM83B	Q5T0W9	1011 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	GPAT2	Q6NUI2	795 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	MB21D1	Q8N884	522 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	SNX21	Q969T3	373 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	SLF1	Q9BQI6	1058 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	TANGO6	Q9C0B7	1094 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	SLK	Q9H2G2	1235 aa	Predicted RBP	13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	SENP2	Q9HC62	589 aa		13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	RBM27	Q9P2N5	1060 aa	Known RBP	13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.44	□□□□□ -0.26
PTPN7-219	ENST00000629151	GREB1L	Q9C091	1923 aa	Predicted RBP	13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	GOLGA8A	A7E2F4	631 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	TMEM232	C9JQI7	657 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	KLRF2	D3W0D1	207 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	PDHX	O00330	501 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	PFKFB2	O60825	505 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	FLOT1	O75955	427 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	CDKL5	O76039	1030 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	MAP2K1	Q02750	393 aa	Predicted RBP	13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	IK	Q13123	557 aa	Predicted RBP	13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	LBX2	Q6XYB7	198 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	MICU3	Q86XE3	530 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	TPCN1	Q9ULQ1	816 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	ISY1	Q9ULR0	285 aa	Known RBP	13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	NID2	Q14112	1375 aa		13.43	□□□□□ -0.26
PTPN7-219	ENST00000629151	CPLX1	O14810	134 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	CA12	O43570	354 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	ZBED4	O75132	1171 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	DSG3	P32926	999 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	KIAA1755	Q5JYT7	1200 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	TREML2	Q5T2D2	321 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	KCTD1	Q719H9	257 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	PTPN18	Q99952	460 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	SPZ1	Q9BXG8	430 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	ZFYVE28	Q9HCC9	887 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	GPCPD1	Q9NPB8	672 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	MAD2L2	Q9UI95	211 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	PPP1R9A	Q9ULJ8	1098 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	ADAMTS5	Q9UNA0	930 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	MTMR7	Q9Y216	660 aa		13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN7-219	ENST00000629151	AOC2	O75106	756 aa		13.41	□□□□□ -0.26
PTPN7-219	ENST00000629151	OAZ1	P54368	228 aa		13.41	□□□□□ -0.26
PTPN7-219	ENST00000629151	SYDE2	Q5VT97	1194 aa		13.41	□□□□□ -0.26
PTPN7-219	ENST00000629151	FAM43A	Q8N2R8	423 aa		13.41	□□□□□ -0.26
PTPN7-219	ENST00000629151	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms