RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 CLIP2Q9UDT6 1046 aa12.49□□□□□ -0.41
TMCO1-209ENST00000628579 RPTORQ8N122 1335 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 SLC15A5A6NIM6 579 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 F5H6K3 240 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 TFRCP02786 760 aaKnown RBP12.48□□□□□ -0.41
TMCO1-209ENST00000628579 ERCC3P19447 782 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 TFAP4Q01664 338 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 PDE4BQ07343 736 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 KLRC3Q07444 240 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 CACNB2Q08289 660 aaPredicted RBP12.48□□□□□ -0.41
TMCO1-209ENST00000628579 GRB14Q14449 540 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 TMEM132BQ14DG7 1078 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 MAP3K21Q5TCX8 1036 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 LRRC47Q8N1G4 583 aaKnown RBP12.48□□□□□ -0.41
TMCO1-209ENST00000628579 MB21D1Q8N884 522 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 NEDD1Q8NHV4 660 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 HMX1Q9NP08 348 aaPredicted RBP12.48□□□□□ -0.41
TMCO1-209ENST00000628579 MTMR4Q9NYA4 1195 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 FLRT1Q9NZU1 646 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 ADAMTS5Q9UNA0 930 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
TMCO1-209ENST00000628579 IVNS1ABPQ9Y6Y0 642 aa12.48□□□□□ -0.41
TMCO1-209ENST00000628579 VWA5AO00534 786 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 NMT2O60551 498 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 FARP2O94887 1054 aaPredicted RBP12.47□□□□□ -0.41
TMCO1-209ENST00000628579 TTLL1O95922 423 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
TMCO1-209ENST00000628579 TSPY3P0CV98 308 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 TSPY8P0CW00 308 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 HSPD1P10809 573 aaKnown RBP12.47□□□□□ -0.41
TMCO1-209ENST00000628579 SDSP20132 328 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 PDE4AP27815 886 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 NPLOC4Q8TAT6 608 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 PPP1R9AQ9ULJ8 1098 aa12.47□□□□□ -0.41
TMCO1-209ENST00000628579 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 CCDC171Q6TFL3 1326 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 FGAP02671 866 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 HOXC6P09630 235 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 ADORA2AP29274 412 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.41
TMCO1-209ENST00000628579 ALX1Q15699 326 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 NCAPG2Q86XI2 1143 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 TICAM2Q86XR7 235 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 TRMT44Q8IYL2 757 aaKnown RBP12.46□□□□□ -0.41
TMCO1-209ENST00000628579 SHCBP1Q8NEM2 672 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 REPS2Q8NFH8 660 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 DIS3LQ8TF46 1054 aaKnown RBP12.46□□□□□ -0.41
TMCO1-209ENST00000628579 MKL1Q969V6 931 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 CHMP4CQ96CF2 233 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 ANAPC4Q9UJX5 808 aa12.46□□□□□ -0.41
TMCO1-209ENST00000628579 ZNF214Q9UL59 606 aaPredicted RBP12.46□□□□□ -0.41
TMCO1-209ENST00000628579 TSPY2A6NKD2 308 aa12.45□□□□□ -0.42
TMCO1-209ENST00000628579 COBLO75128 1261 aa12.45□□□□□ -0.42
TMCO1-209ENST00000628579 HAND2P61296 217 aa12.45□□□□□ -0.42
TMCO1-209ENST00000628579 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
TMCO1-209ENST00000628579 GMCL1P1Q8NEA9 526 aa12.45□□□□□ -0.42
TMCO1-209ENST00000628579 SLF1Q9BQI6 1058 aa12.45□□□□□ -0.42
TMCO1-209ENST00000628579 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
TMCO1-209ENST00000628579 MROH8Q9H579 483 aa12.45□□□□□ -0.42
TMCO1-209ENST00000628579 IL17RBQ9NRM6 502 aa12.45□□□□□ -0.42
TMCO1-209ENST00000628579 STRNO43815 780 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 RANBP6O60518 1105 aaKnown RBP12.44□□□□□ -0.42
TMCO1-209ENST00000628579 IGHA2P01877 340 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 FGRP09769 529 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 CYP2C19P33261 490 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
TMCO1-209ENST00000628579 SLFN13Q68D06 897 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 RASGRP2Q7LDG7 609 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 DPP9Q86TI2 863 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 KIFC2Q96AC6 838 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 PAWRQ96IZ0 340 aaKnown RBP12.44□□□□□ -0.42
TMCO1-209ENST00000628579 DIAPH3Q9NSV4 1193 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 SYNPO2Q9UMS6 1093 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 STX8Q9UNK0 236 aa12.44□□□□□ -0.42
TMCO1-209ENST00000628579 ZMYM6O95789 1325 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 CEP290O15078 2479 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 H0YGN5 161 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 ORC4O43929 436 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 PGK2P07205 417 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 FCER1AP12319 257 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 GSPT1P15170 499 aaKnown RBP12.43□□□□□ -0.42
TMCO1-209ENST00000628579 STAT3P40763 770 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 RRP12Q5JTH9 1297 aaKnown RBP12.43□□□□□ -0.42
TMCO1-209ENST00000628579 MFSD14CQ5VZR4 134 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 LHX8Q68G74 356 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 RIOX2Q8IUF8 465 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 TBC1D10CQ8IV04 446 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 PRPF38AQ8NAV1 312 aaKnown RBP12.43□□□□□ -0.42
TMCO1-209ENST00000628579 TRPV1Q8NER1 839 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 DPF3Q92784 378 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 IL25Q9H293 177 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 TOMM22Q9NS69 142 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 OGDHLQ9ULD0 1010 aa12.43□□□□□ -0.42
TMCO1-209ENST00000628579 FRMPD3Q5JV73 1810 aa12.42□□□□□ -0.42
TMCO1-209ENST00000628579 SLC25A27O95847 323 aa12.42□□□□□ -0.42
TMCO1-209ENST00000628579 BMP3P12645 472 aa12.42□□□□□ -0.42
TMCO1-209ENST00000628579 MCCP23508 829 aa12.42□□□□□ -0.42
TMCO1-209ENST00000628579 SNRNP48Q6IEG0 339 aaKnown RBP12.42□□□□□ -0.42
TMCO1-209ENST00000628579 ABRAQ8N0Z2 381 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms