RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 USP17L2Q6R6M4 530 aa22.35■■□□□ 1.17
CNOT9-209ENST00000627282 DGKHQ86XP1 1220 aa22.35■■□□□ 1.17
CNOT9-209ENST00000627282 ANKS1AQ92625 1134 aa22.35■■□□□ 1.17
CNOT9-209ENST00000627282 TMEM47Q9BQJ4 181 aa22.35■■□□□ 1.17
CNOT9-209ENST00000627282 SH2D4AQ9H788 454 aa22.35■■□□□ 1.17
CNOT9-209ENST00000627282 GPHNQ9NQX3 736 aaPredicted RBP22.35■■□□□ 1.17
CNOT9-209ENST00000627282 TLR2O60603 784 aa22.34■■□□□ 1.17
CNOT9-209ENST00000627282 RPS6KB1P23443 525 aa22.34■■□□□ 1.17
CNOT9-209ENST00000627282 SP3Q02447 781 aa22.34■■□□□ 1.17
CNOT9-209ENST00000627282 CCDC178Q5BJE1 867 aa22.34■■□□□ 1.17
CNOT9-209ENST00000627282 GADL1Q6ZQY3 521 aa22.34■■□□□ 1.17
CNOT9-209ENST00000627282 DHX32Q7L7V1 743 aaKnown RBP22.34■■□□□ 1.17
CNOT9-209ENST00000627282 IGDCC4Q8TDY8 1250 aa22.34■■□□□ 1.17
CNOT9-209ENST00000627282 C12orf42Q96LP6 360 aa22.34■■□□□ 1.17
CNOT9-209ENST00000627282 TCEANC2Q96MN5 208 aa22.34■■□□□ 1.17
CNOT9-209ENST00000627282 VCPKMTQ9H867 229 aa22.34■■□□□ 1.17
CNOT9-209ENST00000627282 IFIT3O14879 490 aaKnown RBP22.33■■□□□ 1.17
CNOT9-209ENST00000627282 TOP1P11387 765 aaKnown RBP22.33■■□□□ 1.17
CNOT9-209ENST00000627282 USP14P54578 494 aa22.33■■□□□ 1.17
CNOT9-209ENST00000627282 PKN2Q16513 984 aaKnown RBP22.33■■□□□ 1.17
CNOT9-209ENST00000627282 ERO1AQ96HE7 468 aa22.33■■□□□ 1.17
CNOT9-209ENST00000627282 LRRC2Q9BYS8 371 aa22.33■■□□□ 1.17
CNOT9-209ENST00000627282 SENP2Q9HC62 589 aa22.33■■□□□ 1.17
CNOT9-209ENST00000627282 SYNPO2Q9UMS6 1093 aa22.33■■□□□ 1.17
CNOT9-209ENST00000627282 LOC285556D6RIA3 1793 aa22.33■■□□□ 1.17
CNOT9-209ENST00000627282 HMGB1P09429 215 aaKnown RBP22.32■■□□□ 1.16
CNOT9-209ENST00000627282 ANKRD1Q15327 319 aa22.32■■□□□ 1.16
CNOT9-209ENST00000627282 TREML2Q5T2D2 321 aa22.32■■□□□ 1.16
CNOT9-209ENST00000627282 SPICE1Q8N0Z3 855 aa22.32■■□□□ 1.16
CNOT9-209ENST00000627282 PROCA1Q8NCQ7 364 aaPredicted RBP22.32■■□□□ 1.16
CNOT9-209ENST00000627282 SH2B1Q9NRF2 756 aaPredicted RBP22.32■■□□□ 1.16
CNOT9-209ENST00000627282 TMOD4Q9NZQ9 345 aa22.32■■□□□ 1.16
CNOT9-209ENST00000627282 F5H6K3 240 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 NDUFB10O96000 172 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 VCAM1P19320 739 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 KLRC3Q07444 240 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 TMEM67Q5HYA8 995 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 MTA3Q9BTC8 594 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 WDR19Q8NEZ3 1342 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 SH2B2O14492 632 aaPredicted RBP22.31■■□□□ 1.16
CNOT9-209ENST00000627282 SART3Q15020 963 aaKnown RBP22.31■■□□□ 1.16
CNOT9-209ENST00000627282 GMCL1P1Q8NEA9 526 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 CD99L2Q8TCZ2 262 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 TMEM87BQ96K49 555 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 PARK7Q99497 189 aaKnown RBP22.31■■□□□ 1.16
CNOT9-209ENST00000627282 LY9Q9HBG7 655 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 GOPCQ9HD26 462 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 AGTPBP1Q9UPW5 1226 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 SLC45A1Q9Y2W3 748 aa22.31■■□□□ 1.16
CNOT9-209ENST00000627282 ADGRA2Q96PE1 1338 aa22.3■■□□□ 1.16
CNOT9-209ENST00000627282 PTMSP20962 102 aa22.3■■□□□ 1.16
CNOT9-209ENST00000627282 IFIT1BQ5T764 474 aaKnown RBP22.3■■□□□ 1.16
CNOT9-209ENST00000627282 RASGRP2Q7LDG7 609 aa22.3■■□□□ 1.16
CNOT9-209ENST00000627282 LPAR1Q92633 364 aa22.3■■□□□ 1.16
CNOT9-209ENST00000627282 ZDHHC9Q9Y397 364 aa22.3■■□□□ 1.16
CNOT9-209ENST00000627282 ERICH2A1L162 156 aa22.29■■□□□ 1.16
CNOT9-209ENST00000627282 RAD21O60216 631 aa22.29■■□□□ 1.16
CNOT9-209ENST00000627282 PKP1Q13835 747 aa22.29■■□□□ 1.16
CNOT9-209ENST00000627282 WTAPQ15007 396 aa22.29■■□□□ 1.16
CNOT9-209ENST00000627282 C17orf99Q6UX52 265 aa22.29■■□□□ 1.16
CNOT9-209ENST00000627282 OTOP1Q7RTM1 612 aa22.29■■□□□ 1.16
CNOT9-209ENST00000627282 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.29■■□□□ 1.16
CNOT9-209ENST00000627282 BAG4O95429 457 aaKnown RBP22.28■■□□□ 1.16
CNOT9-209ENST00000627282 SLFN13Q68D06 897 aa22.28■■□□□ 1.16
CNOT9-209ENST00000627282 PNMA1Q8ND90 353 aa22.28■■□□□ 1.16
CNOT9-209ENST00000627282 NUP88Q99567 741 aaPredicted RBP22.28■■□□□ 1.16
CNOT9-209ENST00000627282 LARP6Q9BRS8 491 aaKnown RBP22.28■■□□□ 1.16
CNOT9-209ENST00000627282 KAT14Q9H8E8 782 aa22.28■■□□□ 1.16
CNOT9-209ENST00000627282 TRIM17Q9Y577 477 aa22.28■■□□□ 1.16
CNOT9-209ENST00000627282 LARGE1O95461 756 aa22.28■■□□□ 1.16
CNOT9-209ENST00000627282 CYP2C8P10632 490 aa22.28■■□□□ 1.16
CNOT9-209ENST00000627282 DEKP35659 375 aaKnown RBP22.28■■□□□ 1.16
CNOT9-209ENST00000627282 CAP1Q01518 475 aa22.28■■□□□ 1.16
CNOT9-209ENST00000627282 FBXO46Q6PJ61 603 aaPredicted RBP22.28■■□□□ 1.16
CNOT9-209ENST00000627282 CHMP4CQ96CF2 233 aa22.28■■□□□ 1.16
CNOT9-209ENST00000627282 RPAP3Q9H6T3 665 aaPredicted RBP22.28■■□□□ 1.16
CNOT9-209ENST00000627282 MTMR7Q9Y216 660 aa22.28■■□□□ 1.16
CNOT9-209ENST00000627282 CCDC85CA6NKD9 419 aa22.27■■□□□ 1.16
CNOT9-209ENST00000627282 WDR46O15213 610 aaKnown RBP22.27■■□□□ 1.16
CNOT9-209ENST00000627282 HOXA7P31268 230 aaPredicted RBP22.27■■□□□ 1.16
CNOT9-209ENST00000627282 LIFRP42702 1097 aa22.27■■□□□ 1.16
CNOT9-209ENST00000627282 GMCL1Q96IK5 515 aa22.27■■□□□ 1.16
CNOT9-209ENST00000627282 EFCC1Q9HA90 598 aa22.27■■□□□ 1.16
CNOT9-209ENST00000627282 CPA4Q9UI42 421 aa22.27■■□□□ 1.16
CNOT9-209ENST00000627282 BRD1O95696 1058 aa22.26■■□□□ 1.15
CNOT9-209ENST00000627282 TOB2Q14106 344 aaPredicted RBP22.26■■□□□ 1.15
CNOT9-209ENST00000627282 GSE1Q14687 1217 aa22.26■■□□□ 1.15
CNOT9-209ENST00000627282 ME3Q16798 604 aa22.26■■□□□ 1.15
CNOT9-209ENST00000627282 FAM83BQ5T0W9 1011 aa22.26■■□□□ 1.15
CNOT9-209ENST00000627282 Q6ZUG5 572 aa22.26■■□□□ 1.15
CNOT9-209ENST00000627282 TPCN1Q9ULQ1 816 aa22.26■■□□□ 1.15
CNOT9-209ENST00000627282 HPS5Q9UPZ3 1129 aa22.26■■□□□ 1.15
CNOT9-209ENST00000627282 HTTP42858 3142 aa22.25■■□□□ 1.15
CNOT9-209ENST00000627282 SNHG28P0DPA3 235 aa22.25■■□□□ 1.15
CNOT9-209ENST00000627282 PDHBP11177 359 aa22.25■■□□□ 1.15
CNOT9-209ENST00000627282 LACTBP83111 547 aaPredicted RBP22.25■■□□□ 1.15
CNOT9-209ENST00000627282 ARHGEF6Q15052 776 aa22.25■■□□□ 1.15
CNOT9-209ENST00000627282 SGMS1Q86VZ5 419 aa22.25■■□□□ 1.15
CNOT9-209ENST00000627282 AGXT2Q9BYV1 514 aa22.25■■□□□ 1.15
CNOT9-209ENST00000627282 USP17L15C9J2P7 530 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms