RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 INHAP05111 366 aa26.5■■□□□ 1.83
SF1-220ENST00000626028 ELNP15502 786 aa26.5■■□□□ 1.83
SF1-220ENST00000626028 RGS2P41220 211 aa26.5■■□□□ 1.83
SF1-220ENST00000626028 MTFR1Q15390 333 aa26.5■■□□□ 1.83
SF1-220ENST00000626028 SPATC1LQ9H0A9 340 aa26.5■■□□□ 1.83
SF1-220ENST00000626028 RNF208Q9H0X6 261 aa26.5■■□□□ 1.83
SF1-220ENST00000626028 IVNS1ABPQ9Y6Y0 642 aa26.5■■□□□ 1.83
SF1-220ENST00000626028 SLC15A5A6NIM6 579 aa26.49■■□□□ 1.83
SF1-220ENST00000626028 TSPY2A6NKD2 308 aa26.49■■□□□ 1.83
SF1-220ENST00000626028 PEX10O60683 326 aa26.49■■□□□ 1.83
SF1-220ENST00000626028 EN2P19622 333 aaPredicted RBP26.49■■□□□ 1.83
SF1-220ENST00000626028 GJA8P48165 433 aa26.49■■□□□ 1.83
SF1-220ENST00000626028 CWC27Q6UX04 472 aaKnown RBP26.49■■□□□ 1.83
SF1-220ENST00000626028 PPP1R9AQ9ULJ8 1098 aa26.49■■□□□ 1.83
SF1-220ENST00000626028 CTDSPL2Q05D32 466 aa26.48■■□□□ 1.83
SF1-220ENST00000626028 APBA2Q99767 749 aa26.48■■□□□ 1.83
SF1-220ENST00000626028 MROH8Q9H579 483 aa26.48■■□□□ 1.83
SF1-220ENST00000626028 NDUFB10O96000 172 aa26.47■■□□□ 1.83
SF1-220ENST00000626028 PTPREP23469 700 aa26.47■■□□□ 1.83
SF1-220ENST00000626028 COPB2P35606 906 aa26.47■■□□□ 1.83
SF1-220ENST00000626028 MAP2K5Q13163 448 aa26.47■■□□□ 1.83
SF1-220ENST00000626028 FAM47AQ5JRC9 791 aa26.47■■□□□ 1.83
SF1-220ENST00000626028 FAM83BQ5T0W9 1011 aa26.47■■□□□ 1.83
SF1-220ENST00000626028 ATG4CQ96DT6 458 aa26.47■■□□□ 1.83
SF1-220ENST00000626028 DSCC1Q9BVC3 393 aa26.47■■□□□ 1.83
SF1-220ENST00000626028 MOV10L1Q9BXT6 1211 aaKnown RBP26.47■■□□□ 1.83
SF1-220ENST00000626028 RNF41Q9H4P4 317 aaPredicted RBP26.47■■□□□ 1.83
SF1-220ENST00000626028 SLC25A27O95847 323 aa26.46■■□□□ 1.83
SF1-220ENST00000626028 HOXC6P09630 235 aa26.46■■□□□ 1.83
SF1-220ENST00000626028 NOVP48745 357 aa26.46■■□□□ 1.83
SF1-220ENST00000626028 GRB14Q14449 540 aa26.46■■□□□ 1.83
SF1-220ENST00000626028 ABRAQ8N0Z2 381 aa26.46■■□□□ 1.83
SF1-220ENST00000626028 PRPF38AQ8NAV1 312 aaKnown RBP26.46■■□□□ 1.83
SF1-220ENST00000626028 PAK6Q9NQU5 681 aaPredicted RBP26.46■■□□□ 1.83
SF1-220ENST00000626028 RAD50Q92878 1312 aa26.45■■□□□ 1.83
SF1-220ENST00000626028 PLXNA1Q9UIW2 1896 aa26.45■■□□□ 1.83
SF1-220ENST00000626028 VWA5AO00534 786 aa26.45■■□□□ 1.82
SF1-220ENST00000626028 RAD21O60216 631 aa26.45■■□□□ 1.82
SF1-220ENST00000626028 MYCP01106 439 aaPredicted RBP26.45■■□□□ 1.82
SF1-220ENST00000626028 GSPT1P15170 499 aaKnown RBP26.45■■□□□ 1.82
SF1-220ENST00000626028 CYP2B6P20813 491 aa26.45■■□□□ 1.82
SF1-220ENST00000626028 SLF1Q9BQI6 1058 aa26.45■■□□□ 1.82
SF1-220ENST00000626028 UNC93B1Q9H1C4 597 aa26.45■■□□□ 1.82
SF1-220ENST00000626028 RPTORQ8N122 1335 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 RANBP6O60518 1105 aaKnown RBP26.44■■□□□ 1.82
SF1-220ENST00000626028 AKNAD1Q5T1N1 836 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 WDR78Q5VTH9 848 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 STAG1Q8WVM7 1258 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 RUFY2Q8WXA3 655 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 TRIB2Q92519 343 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 GMCL1Q96IK5 515 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 TCP11L1Q9NUJ3 509 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 CTNNA3Q9UI47 895 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 FEM1BQ9UK73 627 aa26.44■■□□□ 1.82
SF1-220ENST00000626028 ZNF213O14771 459 aa26.43■■□□□ 1.82
SF1-220ENST00000626028 SGPL1O95470 568 aa26.43■■□□□ 1.82
SF1-220ENST00000626028 FDX1P10109 184 aa26.43■■□□□ 1.82
SF1-220ENST00000626028 ZKSCAN1P17029 563 aaPredicted RBP26.43■■□□□ 1.82
SF1-220ENST00000626028 ERCC3P19447 782 aa26.43■■□□□ 1.82
SF1-220ENST00000626028 MAP3K21Q5TCX8 1036 aa26.43■■□□□ 1.82
SF1-220ENST00000626028 MFSD6Q6ZSS7 791 aa26.43■■□□□ 1.82
SF1-220ENST00000626028 HMX1Q9NP08 348 aaPredicted RBP26.43■■□□□ 1.82
SF1-220ENST00000626028 IL17RBQ9NRM6 502 aa26.43■■□□□ 1.82
SF1-220ENST00000626028 FBXO28Q9NVF7 368 aa26.43■■□□□ 1.82
SF1-220ENST00000626028 STX8Q9UNK0 236 aa26.43■■□□□ 1.82
SF1-220ENST00000626028 PLS1Q14651 629 aa26.42■■□□□ 1.82
SF1-220ENST00000626028 TMEM132BQ14DG7 1078 aa26.42■■□□□ 1.82
SF1-220ENST00000626028 CENPQQ7L2Z9 268 aaPredicted RBP26.42■■□□□ 1.82
SF1-220ENST00000626028 RIOX2Q8IUF8 465 aa26.42■■□□□ 1.82
SF1-220ENST00000626028 U2AF1L4Q8WU68 220 aaKnown RBP26.42■■□□□ 1.82
SF1-220ENST00000626028 SLC5A4Q9NY91 659 aa26.42■■□□□ 1.82
SF1-220ENST00000626028 ZNF214Q9UL59 606 aaPredicted RBP26.42■■□□□ 1.82
SF1-220ENST00000626028 ATP2A1O14983 1001 aa26.41■■□□□ 1.82
SF1-220ENST00000626028 PLA2G6O60733 806 aa26.41■■□□□ 1.82
SF1-220ENST00000626028 BMP3P12645 472 aa26.41■■□□□ 1.82
SF1-220ENST00000626028 SLFN13Q68D06 897 aa26.41■■□□□ 1.82
SF1-220ENST00000626028 LRRC47Q8N1G4 583 aaKnown RBP26.41■■□□□ 1.82
SF1-220ENST00000626028 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.41■■□□□ 1.827e-7■■■■■ 40.1
SF1-220ENST00000626028 TACC3Q9Y6A5 838 aa26.41■■□□□ 1.82
SF1-220ENST00000626028 STAT3P40763 770 aa26.4■■□□□ 1.82
SF1-220ENST00000626028 REPS2Q8NFH8 660 aa26.4■■□□□ 1.82
SF1-220ENST00000626028 SHISA4Q96DD7 197 aa26.4■■□□□ 1.82
SF1-220ENST00000626028 TTC14Q96N46 770 aa26.4■■□□□ 1.82
SF1-220ENST00000626028 NUP88Q99567 741 aaPredicted RBP26.4■■□□□ 1.82
SF1-220ENST00000626028 CRISPLD2Q9H0B8 497 aa26.4■■□□□ 1.82
SF1-220ENST00000626028 INCENPQ9NQS7 918 aa26.4■■□□□ 1.82
SF1-220ENST00000626028 TOMM22Q9NS69 142 aa26.4■■□□□ 1.82
SF1-220ENST00000626028 FRMPD3Q5JV73 1810 aa26.39■■□□□ 1.82
SF1-220ENST00000626028 FCER1AP12319 257 aa26.39■■□□□ 1.82
SF1-220ENST00000626028 OAZ1P54368 228 aa26.39■■□□□ 1.82
SF1-220ENST00000626028 IMMTQ16891 758 aaKnown RBP26.39■■□□□ 1.82
SF1-220ENST00000626028 FAM160B2Q86V87 743 aa26.39■■□□□ 1.82
SF1-220ENST00000626028 NCAPG2Q86XI2 1143 aa26.39■■□□□ 1.82
SF1-220ENST00000626028 CHURC1Q8WUH1 139 aa26.39■■□□□ 1.82
SF1-220ENST00000626028 ESR2Q92731 530 aa26.39■■□□□ 1.82
SF1-220ENST00000626028 TEX13BQ9BXU2 312 aa26.39■■□□□ 1.82
SF1-220ENST00000626028 NBPF3Q9H094 633 aa26.39■■□□□ 1.82
SF1-220ENST00000626028 ADORA2AP29274 412 aa26.38■■□□□ 1.81
SF1-220ENST00000626028 SLC1A4P43007 532 aa26.38■■□□□ 1.81
SF1-220ENST00000626028 STAT2P52630 851 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms