RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
CHD2-205ENST00000625662 RGL2O15211 777 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
CHD2-205ENST00000625662 DEFB132Q7Z7B7 95 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 NEK11Q8NG66 645 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 ZNF274Q96GC6 653 aaPredicted RBP13.12□□□□□ -0.31
CHD2-205ENST00000625662 ZHX2Q9Y6X8 837 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 GOLGA6L10A0A0M3HER8 536 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 SF3B3Q15393 1217 aaKnown RBP13.12□□□□□ -0.31
CHD2-205ENST00000625662 CCDC91Q7Z6B0 441 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 PPFIA3O75145 1194 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 GPSM2P81274 684 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 AGBL3Q8NEM8 1001 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 DYDC1Q8WWB3 177 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 USP42Q9H9J4 1324 aaKnown RBP13.11□□□□□ -0.31
CHD2-205ENST00000625662 MECOMQ03112 1051 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 ZMYM1Q5SVZ6 1142 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 LUZP1Q86V48 1076 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 FNBP4Q8N3X1 1017 aaPredicted RBP13.11□□□□□ -0.31
CHD2-205ENST00000625662 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 CUTAO60888 179 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 ADORA1P30542 326 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 TAF1CQ15572 869 aaPredicted RBP13.11□□□□□ -0.31
CHD2-205ENST00000625662 XKR9Q5GH70 373 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 MYCT1Q8N699 235 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 TMCO5BA8MYB1 307 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 BIN1O00499 593 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 SCG2P13521 617 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 POLGP54098 1239 aaPredicted RBP13.11□□□□□ -0.31
CHD2-205ENST00000625662 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
CHD2-205ENST00000625662 SLIT1O75093 1534 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 POLA2Q14181 598 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 RNF169Q8NCN4 708 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 RNF34Q969K3 372 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 ABCC12Q96J65 1359 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 TNPO2O14787 897 aaKnown RBP13.1□□□□□ -0.31
CHD2-205ENST00000625662 TNNC2P02585 160 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 NEK8Q86SG6 692 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 C19orf81C9J6K1 198 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 NBPF11Q86T75 865 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 PPP2R3CQ969Q6 453 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 ZBED2Q9BTP6 218 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 VPS33BQ9H267 617 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 GAS8O95995 478 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 CETPP11597 493 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 VEGFAP15692 232 aaPredicted RBP13.1□□□□□ -0.31
CHD2-205ENST00000625662 TPH2Q8IWU9 490 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 MIS12Q9H081 205 aa13.1□□□□□ -0.31
CHD2-205ENST00000625662 MROH7-TTC4A0A0A0MT08 1334 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 ASB14A6NK59 587 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
CHD2-205ENST00000625662 FAM167AQ96KS9 214 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 PLA2G12BQ9BX93 195 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 TRAF5O00463 557 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
CHD2-205ENST00000625662 PRR16Q569H4 304 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
CHD2-205ENST00000625662 SLC7A3Q8WY07 619 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 LARSQ9P2J5 1176 aaKnown RBP13.09□□□□□ -0.31
CHD2-205ENST00000625662 LIN9Q5TKA1 542 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 INO80BQ9C086 356 aaPredicted RBP13.09□□□□□ -0.31
CHD2-205ENST00000625662 TDRD3Q9H7E2 651 aaKnown RBP13.09□□□□□ -0.31
CHD2-205ENST00000625662 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 ZMYM6O95789 1325 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 LRRIQ1Q96JM4 1722 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 PLSCR1O15162 318 aa13.09□□□□□ -0.31
CHD2-205ENST00000625662 LBHD1Q9BQE6 289 aaPredicted RBP13.09□□□□□ -0.31
CHD2-205ENST00000625662 LAD1O00515 517 aa13.08□□□□□ -0.32
CHD2-205ENST00000625662 ALDH1A1P00352 501 aa13.08□□□□□ -0.32
CHD2-205ENST00000625662 FAM193AP78312 1265 aa13.08□□□□□ -0.32
CHD2-205ENST00000625662 ANO1Q5XXA6 986 aa13.08□□□□□ -0.32
CHD2-205ENST00000625662 CABP7Q86V35 215 aa13.08□□□□□ -0.32
CHD2-205ENST00000625662 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.08□□□□□ -0.32
CHD2-205ENST00000625662 NSMCE1Q8WV22 266 aa13.08□□□□□ -0.32
CHD2-205ENST00000625662 CELF1Q92879 486 aaKnown RBP13.08□□□□□ -0.32
CHD2-205ENST00000625662 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.32
CHD2-205ENST00000625662 HUNKP57058 714 aa13.08□□□□□ -0.32
CHD2-205ENST00000625662 PTPN12Q05209 780 aaKnown RBP13.08□□□□□ -0.32
CHD2-205ENST00000625662 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
CHD2-205ENST00000625662 SNX14Q9Y5W7 946 aa13.08□□□□□ -0.32
CHD2-205ENST00000625662 NRKQ7Z2Y5 1582 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms