RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 TEX2Q8IWB9 1127 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 TMEM87AQ8NBN3 555 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 SLC26A6Q9BXS9 759 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 PCDH10Q9P2E7 1040 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 ZBTB21Q9ULJ3 1066 aa13.62□□□□□ -0.23
LINC00963-220ENST00000625171 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-220ENST00000625171 MYH8P13535 1937 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 FAM196BA6NMK8 535 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
LINC00963-220ENST00000625171 PLEKHA8P1O95397 391 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 JAG1P78504 1218 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 ICA1Q05084 483 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 KRT40Q6A162 431 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 GALNT17Q6IS24 598 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 BTNL9Q6UXG8 535 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 STAG2Q8N3U4 1231 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 MTMR8Q96EF0 704 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 BEGAINQ9BUH8 593 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 ZNF341Q9BYN7 854 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 SH2D4AQ9H788 454 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 ARHGEF10LQ9HCE6 1279 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 GGA3Q9NZ52 723 aa13.61□□□□□ -0.23
LINC00963-220ENST00000625171 ASTN2O75129 1339 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-220ENST00000625171 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
LINC00963-220ENST00000625171 F5H6K3 240 aa13.6□□□□□ -0.23
LINC00963-220ENST00000625171 CYTH3O43739 400 aa13.6□□□□□ -0.23
LINC00963-220ENST00000625171 MMP1P03956 469 aa13.6□□□□□ -0.23
LINC00963-220ENST00000625171 MLLT1Q03111 559 aaPredicted RBP13.6□□□□□ -0.23
LINC00963-220ENST00000625171 KLRC3Q07444 240 aa13.6□□□□□ -0.23
LINC00963-220ENST00000625171 TRIM29Q14134 588 aa13.6□□□□□ -0.23
LINC00963-220ENST00000625171 CSPP1Q1MSJ5 1256 aa13.6□□□□□ -0.23
LINC00963-220ENST00000625171 SKOR2Q2VWA4 1001 aaPredicted RBP13.6□□□□□ -0.23
LINC00963-220ENST00000625171 NOL9Q5SY16 702 aaKnown RBP13.6□□□□□ -0.23
LINC00963-220ENST00000625171 NBPF12Q5TAG4 269 aaPredicted RBP13.6□□□□□ -0.23
LINC00963-220ENST00000625171 CDAN1Q8IWY9 1227 aa13.6□□□□□ -0.23
LINC00963-220ENST00000625171 DCPSQ96C86 337 aaKnown RBP13.6□□□□□ -0.23
LINC00963-220ENST00000625171 PHF20Q9BVI0 1012 aa13.6□□□□□ -0.23
LINC00963-220ENST00000625171 FOXP1Q9H334 677 aaPredicted RBP13.6□□□□□ -0.23
LINC00963-220ENST00000625171 UNCXA6NJT0 531 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 USP17L5A8MUK1 530 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 SLURP2P0DP57 97 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 SCG2P13521 617 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 KIF23Q02241 960 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-220ENST00000625171 SLC35G1Q2M3R5 365 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 USP17L2Q6R6M4 530 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 MIGA2Q7L4E1 593 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 CAPNS2Q96L46 248 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 WDR18Q9BV38 432 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 SCAND2PQ9GZW5 306 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-220ENST00000625171 CFAP45Q9UL16 551 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 MORC2Q9Y6X9 1032 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-220ENST00000625171 ELP1O95163 1332 aa13.59□□□□□ -0.23
LINC00963-220ENST00000625171 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 ESYT2A0FGR8 921 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 CA12O43570 354 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 GDF11O95390 407 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 CALML3P27482 149 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 MAP2K2P36507 400 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 KRT85P78386 507 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC00963-220ENST00000625171 MAP3K11Q16584 847 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 SLFN13Q68D06 897 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 SULF1Q8IWU6 871 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 DAGLBQ8NCG7 672 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 KIAA1683Q9H0B3 1180 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 GOPCQ9HD26 462 aa13.58□□□□□ -0.24
LINC00963-220ENST00000625171 PNMA6FA0A0J9YX94 578 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 SLC1A4P43007 532 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 USP48Q86UV5 1035 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 SCYL3Q8IZE3 742 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 CMTR1Q8N1G2 835 aaKnown RBP13.57□□□□□ -0.24
LINC00963-220ENST00000625171 CCDC82Q8N4S0 544 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 CCDC12Q8WUD4 166 aaPredicted RBP13.57□□□□□ -0.24
LINC00963-220ENST00000625171 LPAR1Q92633 364 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 RRP36Q96EU6 259 aaKnown RBP13.57□□□□□ -0.24
LINC00963-220ENST00000625171 ZNF396Q96N95 335 aaPredicted RBP13.57□□□□□ -0.24
LINC00963-220ENST00000625171 AIFM3Q96NN9 605 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 VCPKMTQ9H867 229 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 LMBRD1Q9NUN5 540 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 RCOR1Q9UKL0 485 aa13.57□□□□□ -0.24
LINC00963-220ENST00000625171 CCDC85CA6NKD9 419 aa13.56□□□□□ -0.24
LINC00963-220ENST00000625171 USP2O75604 605 aaPredicted RBP13.56□□□□□ -0.24
LINC00963-220ENST00000625171 NDUFB10O96000 172 aa13.56□□□□□ -0.24
LINC00963-220ENST00000625171 BMP3P12645 472 aa13.56□□□□□ -0.24
LINC00963-220ENST00000625171 TRAF1Q13077 416 aa13.56□□□□□ -0.24
LINC00963-220ENST00000625171 NPY5RQ15761 445 aa13.56□□□□□ -0.24
LINC00963-220ENST00000625171 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
LINC00963-220ENST00000625171 CCDC148Q8NFR7 591 aa13.56□□□□□ -0.24
LINC00963-220ENST00000625171 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
LINC00963-220ENST00000625171 POLR3EQ9NVU0 708 aa13.56□□□□□ -0.24
LINC00963-220ENST00000625171 TLL2Q9Y6L7 1015 aa13.56□□□□□ -0.24
LINC00963-220ENST00000625171 C19orf81C9J6K1 198 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 DTNBO60941 627 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 USP14P54578 494 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 DNM1Q05193 864 aaKnown RBP13.55□□□□□ -0.24
LINC00963-220ENST00000625171 SHROOM1Q2M3G4 852 aaPredicted RBP13.55□□□□□ -0.24
LINC00963-220ENST00000625171 MYSM1Q5VVJ2 828 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
LINC00963-220ENST00000625171 OTUD7BQ6GQQ9 843 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms