RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 KSR2Q6VAB6 950 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 CEP57Q86XR8 500 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 LRRC49Q8IUZ0 686 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 SYNE4Q8N205 404 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 SMARCC2Q8TAQ2 1214 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 SREK1Q8WXA9 508 aaKnown RBP10.3□□□□□ -0.76
USB1-216ENST00000624720 GCC1Q96CN9 775 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 SUCLG2Q96I99 432 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 GSDMAQ96QA5 445 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 TCHPQ9BT92 498 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 UTP14AQ9BVJ6 771 aaKnown RBP10.3□□□□□ -0.76
USB1-216ENST00000624720 SYNCQ9H7C4 482 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 AASDHPPTQ9NRN7 309 aa10.3□□□□□ -0.76
USB1-216ENST00000624720 PABPN1LA6NDY0 278 aaKnown RBP10.29□□□□□ -0.76
USB1-216ENST00000624720 B3GALNT1O75752 331 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 LDHAP00338 332 aaKnown RBP10.29□□□□□ -0.76
USB1-216ENST00000624720 IGKV5-2P06315 115 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 INPP5BP32019 993 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 TPD52L1Q16890 204 aaPredicted RBP10.29□□□□□ -0.76
USB1-216ENST00000624720 RC3H1Q5TC82 1133 aaKnown RBP10.29□□□□□ -0.76
USB1-216ENST00000624720 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
USB1-216ENST00000624720 PLEKHM2Q8IWE5 1019 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 C2orf49Q9BVC5 232 aaPredicted RBP10.29□□□□□ -0.76
USB1-216ENST00000624720 BICC1Q9H694 974 aaKnown RBP10.29□□□□□ -0.76
USB1-216ENST00000624720 BZW2Q9Y6E2 419 aaKnown RBP10.29□□□□□ -0.76
USB1-216ENST00000624720 NDUFB9Q9Y6M9 179 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 CPDO75976 1380 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 SPTLC2O15270 562 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 MCM2P49736 904 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 ARHGAP29Q52LW3 1261 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 EPHA10Q5JZY3 1008 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 FKBP15Q5T1M5 1219 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 CCDC170Q8IYT3 715 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 ZFAND2BQ8WV99 257 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 ZNF304Q9HCX3 659 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.29□□□□□ -0.76
USB1-216ENST00000624720 ALS2Q96Q42 1657 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 ATP10DQ9P241 1426 aa10.29□□□□□ -0.76
USB1-216ENST00000624720 A0A087WZG4 1122 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 ERICH2A1L162 156 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 KDM1AO60341 852 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 ZNF131P52739 623 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 RABL6Q3YEC7 729 aaPredicted RBP10.28□□□□□ -0.76
USB1-216ENST00000624720 MIS18BP1Q6P0N0 1132 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 AATFQ9NY61 560 aaKnown RBP eCLIP10.28□□□□□ -0.76
USB1-216ENST00000624720 TBKBP1A7MCY6 615 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 P4HA2O15460 535 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 DDX58O95786 925 aaKnown RBP10.28□□□□□ -0.76
USB1-216ENST00000624720 SCG2P13521 617 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 CEP85LQ5SZL2 805 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 GBP7Q8N8V2 638 aaPredicted RBP10.28□□□□□ -0.76
USB1-216ENST00000624720 HYPKQ9NX55 129 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 DDX20Q9UHI6 824 aaKnown RBP10.28□□□□□ -0.76
USB1-216ENST00000624720 TBCAO75347 108 aaKnown RBP10.28□□□□□ -0.76
USB1-216ENST00000624720 PRPF40AO75400 957 aaKnown RBP10.28□□□□□ -0.76
USB1-216ENST00000624720 PSMD7P51665 324 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 CCDC57Q2TAC2 916 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 DPY19L2Q6NUT2 758 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 TMX3Q96JJ7 454 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 ZMAT2Q96NC0 199 aaKnown RBP10.28□□□□□ -0.76
USB1-216ENST00000624720 ZCWPW1Q9H0M4 648 aa10.28□□□□□ -0.76
USB1-216ENST00000624720 CCDC8Q9H0W5 538 aaPredicted RBP10.28□□□□□ -0.76
USB1-216ENST00000624720 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.28□□□□□ -0.76
USB1-216ENST00000624720 UTRNP46939 3433 aa10.27□□□□□ -0.76
USB1-216ENST00000624720 GOLGA6L9A6NEM1 432 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 ATP9BO43861 1147 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 DTNBO60941 627 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 KIAA0754O94854 1291 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 TBC1D8O95759 1140 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 MKRN3Q13064 507 aaKnown RBP10.27□□□□□ -0.77
USB1-216ENST00000624720 TBC1D9Q6ZT07 1266 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 TSC22D3Q99576 134 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 SLC39A2Q9NP94 309 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 LUC7LQ9NQ29 371 aaKnown RBP10.27□□□□□ -0.77
USB1-216ENST00000624720 MAFFQ9ULX9 164 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 CAPN7Q9Y6W3 813 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 A0A1B0GVG6 124 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 BICDL1Q6ZP65 573 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 UNC5CLQ8IV45 518 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 SLC15A3Q8IY34 581 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 GALNT15Q8N3T1 639 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 ALDH8A1Q9H2A2 487 aaPredicted RBP10.27□□□□□ -0.77
USB1-216ENST00000624720 PCDH18Q9HCL0 1135 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 VPS18Q9P253 973 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 FAM169AQ9Y6X4 670 aa10.27□□□□□ -0.77
USB1-216ENST00000624720 GRM8O00222 908 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 SASH3O75995 380 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 GFPT2O94808 682 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 MBD3O95983 291 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 HSPA1AP0DMV8 641 aaKnown RBP10.26□□□□□ -0.77
USB1-216ENST00000624720 HSPA1BP0DMV9 641 aaKnown RBP10.26□□□□□ -0.77
USB1-216ENST00000624720 GNAT1P11488 350 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 GNAT2P19087 354 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 SDSP20132 328 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 MCM3P25205 808 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 ATP8B2P98198 1209 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 ACTN3Q08043 901 aaPredicted RBP10.26□□□□□ -0.77
USB1-216ENST00000624720 ELP1O95163 1332 aa10.26□□□□□ -0.77
USB1-216ENST00000624720 SART1O43290 800 aaKnown RBP10.26□□□□□ -0.77
USB1-216ENST00000624720 CYP1A2P05177 515 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms