RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 C1orf74Q96LT6 269 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 MOGAT1Q96PD6 335 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 MRPL9Q9BYD2 267 aaKnown RBP9.82□□□□□ -0.84
CDKL5-206ENST00000623610 ANKEF1Q9NU02 776 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 ZFATQ9P243 1243 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 NOD1Q9Y239 953 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 XRN1Q8IZH2 1706 aaKnown RBP9.82□□□□□ -0.84
CDKL5-206ENST00000623610 NUTM2BA6NNL0 878 aaPredicted RBP9.82□□□□□ -0.84
CDKL5-206ENST00000623610 NUTM2EB1AL46 878 aaPredicted RBP9.82□□□□□ -0.84
CDKL5-206ENST00000623610 TOM1O60784 492 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 ECE1P42892 770 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 MRPS35P82673 323 aaKnown RBP9.82□□□□□ -0.84
CDKL5-206ENST00000623610 TMEM132EQ6IEE7 984 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 FAM117BQ6P1L5 589 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 TOGARAM2Q6ZUX3 1019 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 TBC1D1Q86TI0 1168 aaPredicted RBP9.82□□□□□ -0.84
CDKL5-206ENST00000623610 NUTM2AQ8IVF1 878 aaPredicted RBP9.82□□□□□ -0.84
CDKL5-206ENST00000623610 CARNMT1Q8N4J0 409 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 FAM26EQ8N5C1 309 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 USP6NLQ92738 828 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 L3MBTL2Q969R5 705 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 CRELD1Q96HD1 420 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 GTPBP4Q9BZE4 634 aaKnown RBP9.82□□□□□ -0.84
CDKL5-206ENST00000623610 CCDC8Q9H0W5 538 aaPredicted RBP9.82□□□□□ -0.84
CDKL5-206ENST00000623610 CDHR5Q9HBB8 845 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 GGT7Q9UJ14 662 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 BLOC1S6Q9UL45 172 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 C2CD2Q9Y426 696 aa9.82□□□□□ -0.84
CDKL5-206ENST00000623610 MYOM2P54296 1465 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 TMCO5BA8MYB1 307 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 TMEM127O75204 238 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 GRK2P25098 689 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 MTMR1Q13613 665 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 SPOCD1Q6ZMY3 1216 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 DZIP1LQ8IYY4 767 aaKnown RBP9.81□□□□□ -0.84
CDKL5-206ENST00000623610 LSMEM1Q8N8F7 131 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 FBF1Q8TES7 1133 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 RBM18Q96H35 190 aaKnown RBP9.81□□□□□ -0.84
CDKL5-206ENST00000623610 ALPK1Q96QP1 1244 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 AASDHPPTQ9NRN7 309 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 MCM8Q9UJA3 840 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 ZNF180Q9UJW8 692 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 SUPT16HQ9Y5B9 1047 aaKnown RBP9.81□□□□□ -0.84
CDKL5-206ENST00000623610 NRXN1Q9ULB1 1477 aa9.81□□□□□ -0.84
CDKL5-206ENST00000623610 KRT38O76015 456 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 MAPK9P45984 424 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 CACNB2Q08289 660 aaPredicted RBP9.8□□□□□ -0.84
CDKL5-206ENST00000623610 SRLQ86TD4 932 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 NKAPQ8N5F7 415 aaKnown RBP9.8□□□□□ -0.84
CDKL5-206ENST00000623610 CCDC191Q8NCU4 936 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 CLIP2Q9UDT6 1046 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 GIMAP2Q9UG22 337 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.8□□□□□ -0.84
CDKL5-206ENST00000623610 V9GYY5 206 aaPredicted RBP9.8□□□□□ -0.84
CDKL5-206ENST00000623610 C9IYK1 514 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 E2F6O75461 281 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 ASMTLO95671 621 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 CCNCP24863 283 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 DGKGP49619 791 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 SEPHS1P49903 392 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 SAPCD2Q86UD0 394 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 PLEKHM2Q8IWE5 1019 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 VPS52Q8N1B4 723 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 NUP133Q8WUM0 1156 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 NCOA5Q9HCD5 579 aaKnown RBP9.8□□□□□ -0.84
CDKL5-206ENST00000623610 KIAA1586Q9HCI6 787 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 EXOC1Q9NV70 894 aa9.8□□□□□ -0.84
CDKL5-206ENST00000623610 F8W031 263 aaPredicted RBP9.79□□□□□ -0.84
CDKL5-206ENST00000623610 PLOD3O60568 738 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 NCOA4Q13772 614 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 ATP13A4Q4VNC1 1196 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 RRP12Q5JTH9 1297 aaKnown RBP9.79□□□□□ -0.84
CDKL5-206ENST00000623610 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 USP31Q70CQ4 1352 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 HS2ST1Q7LGA3 356 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 TRIM74Q86UV6 250 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 TRIM73Q86UV7 250 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 ASXL1Q8IXJ9 1541 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 DCLK2Q8N568 766 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 USP33Q8TEY7 942 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 KATNAL1Q9BW62 490 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 SLC13A1Q9BZW2 595 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 ZNF304Q9HCX3 659 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 MED4Q9NPJ6 270 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 ZNF112Q9UJU3 913 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 KNSTRNQ9Y448 316 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 MSH6P52701 1360 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 ROBO2Q9HCK4 1378 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 ALDH1B1P30837 517 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 HOXD12P35452 270 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 RBM6P78332 1123 aaKnown RBP9.79□□□□□ -0.84
CDKL5-206ENST00000623610 NR1H3Q13133 447 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 PRKG2Q13237 762 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 LDHAL6AQ6ZMR3 332 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 TMEM151BQ8IW70 566 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 CELF2-AS1Q8N7Q2 184 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 NAT8LQ8N9F0 302 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 MTMR8Q96EF0 704 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 TCHPQ9BT92 498 aa9.79□□□□□ -0.84
CDKL5-206ENST00000623610 TRIM8Q9BZR9 551 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms