RNA–Protein interactions for RNA: ENST00000622489.4

LRRC23-215, Transcript of leucine rich repeat containing 23, humanhuman

TSL 5 BASIC

Gene LRRC23, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-215ENST00000622489 KIF3AQ9Y496 699 aa20.52■□□□□ 0.88
LRRC23-215ENST00000622489 TRPM7Q96QT4 1865 aa20.52■□□□□ 0.87
LRRC23-215ENST00000622489 FRMPD2Q68DX3 1309 aaPredicted RBP20.52■□□□□ 0.87
LRRC23-215ENST00000622489 MYH4Q9Y623 1939 aa20.51■□□□□ 0.87
LRRC23-215ENST00000622489 WDR46O15213 610 aaKnown RBP20.51■□□□□ 0.87
LRRC23-215ENST00000622489 HMGCS2P54868 508 aa20.51■□□□□ 0.87
LRRC23-215ENST00000622489 ZNF543Q08ER8 600 aa20.51■□□□□ 0.87
LRRC23-215ENST00000622489 SNAPC2Q13487 334 aa20.51■□□□□ 0.87
LRRC23-215ENST00000622489 IPO9Q96P70 1041 aaKnown RBP20.51■□□□□ 0.87
LRRC23-215ENST00000622489 LLPHQ9BRT6 129 aaKnown RBP20.51■□□□□ 0.87
LRRC23-215ENST00000622489 SNHG28P0DPA3 235 aa20.5■□□□□ 0.87
LRRC23-215ENST00000622489 ZNF157P51786 506 aaPredicted RBP20.5■□□□□ 0.87
LRRC23-215ENST00000622489 TMTC3Q6ZXV5 915 aa20.5■□□□□ 0.87
LRRC23-215ENST00000622489 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
LRRC23-215ENST00000622489 INTS4Q96HW7 963 aaKnown RBP20.5■□□□□ 0.87
LRRC23-215ENST00000622489 GPCPD1Q9NPB8 672 aa20.5■□□□□ 0.87
LRRC23-215ENST00000622489 SMC3Q9UQE7 1217 aa20.5■□□□□ 0.87
LRRC23-215ENST00000622489 KLRF2D3W0D1 207 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 IRF6O14896 467 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 GOLGA8HP0CJ92 632 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 ZBTB48P10074 688 aaPredicted RBP20.49■□□□□ 0.87
LRRC23-215ENST00000622489 ADD1P35611 737 aaKnown RBP20.49■□□□□ 0.87
LRRC23-215ENST00000622489 HMGN5P82970 282 aaKnown RBP20.49■□□□□ 0.87
LRRC23-215ENST00000622489 CUL4AQ13619 759 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 FAM83BQ5T0W9 1011 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 GADL1Q6ZQY3 521 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 PAXIP1Q6ZW49 1069 aaPredicted RBP20.49■□□□□ 0.87
LRRC23-215ENST00000622489 KCTD1Q719H9 257 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 FASTKD5Q7L8L6 764 aaKnown RBP20.49■□□□□ 0.87
LRRC23-215ENST00000622489 SAPCD2Q86UD0 394 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 FAM184AQ8NB25 1140 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 WNK4Q96J92 1243 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 TANGO6Q9C0B7 1094 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 RBM27Q9P2N5 1060 aaKnown RBP20.49■□□□□ 0.87
LRRC23-215ENST00000622489 MAD2L2Q9UI95 211 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 TLL2Q9Y6L7 1015 aa20.49■□□□□ 0.87
LRRC23-215ENST00000622489 PALM3A6NDB9 673 aaPredicted RBP20.48■□□□□ 0.87
LRRC23-215ENST00000622489 CDC27P30260 824 aa20.48■□□□□ 0.87
LRRC23-215ENST00000622489 STAT2P52630 851 aa20.48■□□□□ 0.87
LRRC23-215ENST00000622489 GTF2A2P52657 109 aa20.48■□□□□ 0.87
LRRC23-215ENST00000622489 SSRP1Q08945 709 aaKnown RBP20.48■□□□□ 0.87
LRRC23-215ENST00000622489 RGMBQ6NW40 437 aa20.48■□□□□ 0.87
LRRC23-215ENST00000622489 CHURC1Q8WUH1 139 aa20.48■□□□□ 0.87
LRRC23-215ENST00000622489 C12orf42Q96LP6 360 aa20.48■□□□□ 0.87
LRRC23-215ENST00000622489 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
LRRC23-215ENST00000622489 SEC63Q9UGP8 760 aaKnown RBP20.48■□□□□ 0.87
LRRC23-215ENST00000622489 KCNH4Q9UQ05 1017 aa20.48■□□□□ 0.87
LRRC23-215ENST00000622489 PTPDC1A2A3K4 754 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 TMEM232C9JQI7 657 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 VCAM1P19320 739 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 PABPC4Q13310 644 aaKnown RBP eCLIP20.47■□□□□ 0.87
LRRC23-215ENST00000622489 SH3D19Q5HYK7 790 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 FAM160B2Q86V87 743 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 CCDC82Q8N4S0 544 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 SPRYD3Q8NCJ5 442 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 PROCA1Q8NCQ7 364 aaPredicted RBP20.47■□□□□ 0.87
LRRC23-215ENST00000622489 WASF1Q92558 559 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 CCDC102AQ96A19 550 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 NUP88Q99567 741 aaPredicted RBP20.47■□□□□ 0.87
LRRC23-215ENST00000622489 EMILIN3Q9NT22 766 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 FEM1BQ9UK73 627 aa20.47■□□□□ 0.87
LRRC23-215ENST00000622489 CTDP1Q9Y5B0 961 aaPredicted RBP20.47■□□□□ 0.87
LRRC23-215ENST00000622489 A0A0G2JLL6 359 aaPredicted RBP20.46■□□□□ 0.87
LRRC23-215ENST00000622489 PLEKHA8P1O95397 391 aa20.46■□□□□ 0.87
LRRC23-215ENST00000622489 CETPP11597 493 aa20.46■□□□□ 0.87
LRRC23-215ENST00000622489 IFNAR1P17181 557 aa20.46■□□□□ 0.87
LRRC23-215ENST00000622489 APLP1P51693 650 aa20.46■□□□□ 0.87
LRRC23-215ENST00000622489 MKRN3Q13064 507 aaKnown RBP20.46■□□□□ 0.87
LRRC23-215ENST00000622489 SPRYD7Q5W111 196 aa20.46■□□□□ 0.87
LRRC23-215ENST00000622489 RASGRP2Q7LDG7 609 aa20.46■□□□□ 0.87
LRRC23-215ENST00000622489 PRRT2Q7Z6L0 340 aaPredicted RBP20.46■□□□□ 0.87
LRRC23-215ENST00000622489 STAG2Q8N3U4 1231 aa20.46■□□□□ 0.87
LRRC23-215ENST00000622489 HHIPL1Q96JK4 782 aa20.46■□□□□ 0.87
LRRC23-215ENST00000622489 SLC26A6Q9BXS9 759 aa20.46■□□□□ 0.87
LRRC23-215ENST00000622489 RPAP3Q9H6T3 665 aaPredicted RBP20.46■□□□□ 0.87
LRRC23-215ENST00000622489 SMARCA1P28370 1054 aa20.45■□□□□ 0.86
LRRC23-215ENST00000622489 SLC4A3P48751 1232 aa20.45■□□□□ 0.86
LRRC23-215ENST00000622489 SAMD1Q6SPF0 538 aaPredicted RBP20.45■□□□□ 0.86
LRRC23-215ENST00000622489 NSUN7Q8NE18 718 aaKnown RBP20.45■□□□□ 0.86
LRRC23-215ENST00000622489 RRP36Q96EU6 259 aaKnown RBP20.45■□□□□ 0.86
LRRC23-215ENST00000622489 SPZ1Q9BXG8 430 aa20.45■□□□□ 0.86
LRRC23-215ENST00000622489 FAM217BQ9NTX9 383 aaPredicted RBP20.45■□□□□ 0.86
LRRC23-215ENST00000622489 ORC3Q9UBD5 711 aaPredicted RBP20.45■□□□□ 0.86
LRRC23-215ENST00000622489 USP17L15C9J2P7 530 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 USP17L13C9JLJ4 530 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 USP17L11C9JVI0 530 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 USP17L18D6R9N7 530 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 USP17L22D6RA61 530 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 USP17L17D6RBQ6 530 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 USP17L19D6RCP7 530 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 USP17L20D6RJB6 530 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 FLOT1O75955 427 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 FMNL1O95466 1100 aaPredicted RBP20.44■□□□□ 0.86
LRRC23-215ENST00000622489 USP17L24Q0WX57 530 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 SYDE2Q5VT97 1194 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 RASAL3Q86YV0 1011 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 CMTR1Q8N1G2 835 aaKnown RBP20.44■□□□□ 0.86
LRRC23-215ENST00000622489 SRBD1Q8N5C6 995 aaKnown RBP20.44■□□□□ 0.86
LRRC23-215ENST00000622489 PHKBQ93100 1093 aa20.44■□□□□ 0.86
LRRC23-215ENST00000622489 DDX11Q96FC9 970 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms