RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 SGMS1Q86VZ5 419 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 C10orf71Q711Q0 1435 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 FMNL1O95466 1100 aaPredicted RBP14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 HMGCS2P54868 508 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 CEP57L1Q8IYX8 460 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 IDI2Q9BXS1 227 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 NUP62CLQ9H1M0 184 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 MTMR6Q9Y217 621 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 WDR19Q8NEZ3 1342 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 INPP5BP32019 993 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 RASGRP4Q8TDF6 673 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 GLIS2Q9BZE0 524 aaPredicted RBP14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 IVNS1ABPQ9Y6Y0 642 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 WNK3Q9BYP7 1800 aa14.28□□□□□ -0.12
SCAMP1-207ENST00000621999 ADM5C9JUS6 153 aa14.27□□□□□ -0.12
SCAMP1-207ENST00000621999 TMTC3Q6ZXV5 915 aa14.27□□□□□ -0.12
SCAMP1-207ENST00000621999 MYCLP12524 364 aaPredicted RBP14.27□□□□□ -0.12
SCAMP1-207ENST00000621999 SP4Q02446 784 aa14.27□□□□□ -0.12
SCAMP1-207ENST00000621999 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.12
SCAMP1-207ENST00000621999 MRIQ9BWK5 157 aa14.27□□□□□ -0.12
SCAMP1-207ENST00000621999 NT5C2P49902 561 aa14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 MTMR2Q13614 643 aa14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 RILPL1Q5EBL4 403 aa14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 TTBK2Q6IQ55 1244 aa14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 BLIDQ8IZY5 108 aa14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 UBE2Q2LH0YL09 131 aa14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 NONOQ15233 471 aaKnown RBP eCLIP14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 FAM83AQ86UY5 434 aa14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 KCNG4Q8TDN1 519 aa14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 MTA3Q9BTC8 594 aa14.27□□□□□ -0.13
SCAMP1-207ENST00000621999 CCNT1O60563 726 aaKnown RBP14.26□□□□□ -0.13
SCAMP1-207ENST00000621999 BRD1O95696 1058 aa14.26□□□□□ -0.13
SCAMP1-207ENST00000621999 TAF1P21675 1872 aa14.26□□□□□ -0.13
SCAMP1-207ENST00000621999 PABPC4Q13310 644 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCAMP1-207ENST00000621999 NCAPG2Q86XI2 1143 aa14.26□□□□□ -0.13
SCAMP1-207ENST00000621999 YBX3P16989 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
SCAMP1-207ENST00000621999 CDC37Q16543 378 aaPredicted RBP14.26□□□□□ -0.13
SCAMP1-207ENST00000621999 BAZ2BQ9UIF8 2168 aaKnown RBP14.26□□□□□ -0.13
SCAMP1-207ENST00000621999 CELF2O95319 508 aaKnown RBP14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 MAP3K9P80192 1104 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 CKAP2LQ8IYA6 745 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 ACER1Q8TDN7 264 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 NR5A1Q13285 461 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 INF2Q27J81 1249 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 RCSD1Q6JBY9 416 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 BMP2KQ9NSY1 1161 aaPredicted RBP14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 CCDC39Q9UFE4 941 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 VWA3AA6NCI4 1184 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 PRPF3O43395 683 aaKnown RBP14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 NDUFB10O96000 172 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 CAP2P40123 477 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 NOC3LQ8WTT2 800 aaKnown RBP14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 PGBD1Q96JS3 809 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 SHMT1P34896 483 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 ECE1P42892 770 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 UBE2HP62256 183 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 GSE1Q14687 1217 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 TTC38Q5R3I4 469 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 ANO1Q5XXA6 986 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 NOSTRINQ8IVI9 506 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 ANKRD35Q8N283 1001 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 CNNM3Q8NE01 707 aa14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 MRPL11Q9Y3B7 192 aaKnown RBP14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 ASTN2O75129 1339 aaPredicted RBP14.25□□□□□ -0.13
SCAMP1-207ENST00000621999 BMP15O95972 392 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 CDK11BP21127 795 aaKnown RBP14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 MMP14P50281 582 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 KRT25Q7Z3Z0 450 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 KCNB2Q92953 911 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 PLIN2Q99541 437 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 MPHOSPH6Q99547 160 aaKnown RBP14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 MYSM1Q5VVJ2 828 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 GLT8D2Q9H1C3 349 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 GLTPD2A6NH11 291 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 GOLGA6L6A8MZA4 724 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 UBXN2AP68543 259 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 GRM4Q14833 912 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 SPECC1Q5M775 1068 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 SRBD1Q8N5C6 995 aaKnown RBP14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 DCAF4Q8WV16 495 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
SCAMP1-207ENST00000621999 SYCE3A1L190 88 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 CTNND1O60716 968 aaKnown RBP14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 TXKP42681 527 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 COL9A3Q14050 684 aaPredicted RBP14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 DTHD1Q6ZMT9 781 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 CALML4Q96GE6 196 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 MYH3P11055 1940 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 ZNF280CQ8ND82 737 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 EGFRP00533 1210 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 ALDH8A1Q9H2A2 487 aaPredicted RBP14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 FZD9O00144 591 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 COL1A1P02452 1464 aaPredicted RBP14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 HUNKP57058 714 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 ADGRF4Q8IZF3 695 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 EHD4Q9H223 541 aa14.23□□□□□ -0.13
SCAMP1-207ENST00000621999 PNMA6FA0A0J9YX94 578 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms