RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ZYXQ15942 572 aaKnown RBP7.49□□□□□ -1.21
BRCA1-229ENST00000621897 MLANAQ16655 118 aa7.49□□□□□ -1.21
BRCA1-229ENST00000621897 TMEM67Q5HYA8 995 aa7.49□□□□□ -1.21
BRCA1-229ENST00000621897 INTS3Q68E01 1043 aaKnown RBP7.49□□□□□ -1.21
BRCA1-229ENST00000621897 PPFIBP1Q86W92 1011 aa7.49□□□□□ -1.21
BRCA1-229ENST00000621897 LSRQ86X29 649 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-229ENST00000621897 KRTAP1-3Q8IUG1 177 aa7.49□□□□□ -1.21
BRCA1-229ENST00000621897 DAGLBQ8NCG7 672 aa7.49□□□□□ -1.21
BRCA1-229ENST00000621897 ENOX1Q8TC92 643 aaKnown RBP7.49□□□□□ -1.21
BRCA1-229ENST00000621897 FOXP3Q9BZS1 431 aa7.49□□□□□ -1.21
BRCA1-229ENST00000621897 EFR3BQ9Y2G0 817 aa7.49□□□□□ -1.21
BRCA1-229ENST00000621897 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-229ENST00000621897 ZNF281Q9Y2X9 895 aa7.49□□□□□ -1.21
BRCA1-229ENST00000621897 LRRC10BA6NIK2 292 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 SIGLEC6O43699 453 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 C8AP07357 584 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 RAC2P15153 192 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 TIGD5Q53EQ6 642 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 TDRD10Q5VZ19 366 aaKnown RBP7.48□□□□□ -1.21
BRCA1-229ENST00000621897 PRR23BQ6ZRT6 265 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 TAB3Q8N5C8 712 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-229ENST00000621897 RBBP8NLQ8NC74 664 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-229ENST00000621897 ABHD4Q8TB40 342 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 MYLIPQ8WY64 445 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 GPRASP2Q96D09 838 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 C19orf44Q9H6X5 657 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 GFOD1Q9NXC2 390 aa7.48□□□□□ -1.21
BRCA1-229ENST00000621897 SUCOQ9UBS9 1254 aaKnown RBP7.48□□□□□ -1.21
BRCA1-229ENST00000621897 SHOXO15266 292 aa7.47□□□□□ -1.21
BRCA1-229ENST00000621897 SOX9P48436 509 aa7.47□□□□□ -1.21
BRCA1-229ENST00000621897 MESP2Q0VG99 397 aa7.47□□□□□ -1.21
BRCA1-229ENST00000621897 ZNF655Q8N720 491 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-229ENST00000621897 PDZD8Q8NEN9 1154 aa7.47□□□□□ -1.21
BRCA1-229ENST00000621897 ZNF428Q96B54 188 aa7.47□□□□□ -1.21
BRCA1-229ENST00000621897 TM9SF2Q99805 663 aa7.47□□□□□ -1.21
BRCA1-229ENST00000621897 G6PC3Q9BUM1 346 aa7.47□□□□□ -1.21
BRCA1-229ENST00000621897 TMEM82A0PJX8 343 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 MEIS1O00470 390 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 GJA8P48165 433 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 PMS1P54277 932 aaKnown RBP7.46□□□□□ -1.22
BRCA1-229ENST00000621897 AUHQ13825 339 aaKnown RBP7.46□□□□□ -1.22
BRCA1-229ENST00000621897 BBS9Q3SYG4 887 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 MPZL3Q6UWV2 235 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 ZPBP2Q6X784 338 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 UNC5AQ6ZN44 842 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 RNF111Q6ZNA4 994 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 RASGRP4Q8TDF6 673 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 LINC01599Q8WXQ3 324 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 RNF32Q9H0A6 362 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 ACBD3Q9H3P7 528 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 CHST7Q9NS84 486 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 FBXL21Q9UKT6 434 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 TCFL5Q9UL49 500 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 CCDC9Q9Y3X0 531 aaKnown RBP7.46□□□□□ -1.22
BRCA1-229ENST00000621897 PCDHB12Q9Y5F1 795 aa7.46□□□□□ -1.22
BRCA1-229ENST00000621897 FKTNO75072 461 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 FARP2O94887 1054 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-229ENST00000621897 EFEMP2O95967 443 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 SYPP08247 313 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 GUCY2CP25092 1073 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 RPL10P27635 214 aaKnown RBP7.45□□□□□ -1.22
BRCA1-229ENST00000621897 CTSKP43235 329 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 COL9A2Q14055 689 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-229ENST00000621897 ZNF124Q15973 351 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 DCAF15Q66K64 600 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 DHX38Q92620 1227 aaKnown RBP7.45□□□□□ -1.22
BRCA1-229ENST00000621897 KCNK12Q9HB15 430 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 FAM86C1Q9NVL1 165 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 FAM53CQ9NYF3 392 aa7.45□□□□□ -1.22
BRCA1-229ENST00000621897 PCBP3P57721 371 aaKnown RBP7.44□□□□□ -1.22
BRCA1-229ENST00000621897 AXDND1Q5T1B0 1012 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-229ENST00000621897 WAPLQ7Z5K2 1190 aa7.44□□□□□ -1.22
BRCA1-229ENST00000621897 CCDC144CPQ8IYA2 1237 aa7.44□□□□□ -1.22
BRCA1-229ENST00000621897 C7orf61Q8IZ16 206 aa7.44□□□□□ -1.22
BRCA1-229ENST00000621897 OXR1Q8N573 874 aa7.44□□□□□ -1.22
BRCA1-229ENST00000621897 LINC00116Q8NCU8 138 aa7.44□□□□□ -1.22
BRCA1-229ENST00000621897 DHRS1Q96LJ7 313 aa7.44□□□□□ -1.22
BRCA1-229ENST00000621897 TGIF2Q9GZN2 237 aa7.44□□□□□ -1.22
BRCA1-229ENST00000621897 LTBP3Q9NS15 1303 aa7.44□□□□□ -1.22
BRCA1-229ENST00000621897 FITM1A5D6W6 292 aa7.43□□□□□ -1.22
BRCA1-229ENST00000621897 NOTOA8MTQ0 251 aa7.43□□□□□ -1.22
BRCA1-229ENST00000621897 TP53P04637 393 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-229ENST00000621897 YBX3P16989 372 aaKnown RBP eCLIP7.43□□□□□ -1.22
BRCA1-229ENST00000621897 NASPP49321 788 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-229ENST00000621897 GALK1P51570 392 aa7.43□□□□□ -1.22
BRCA1-229ENST00000621897 DUSP4Q13115 394 aa7.43□□□□□ -1.22
BRCA1-229ENST00000621897 NR0B2Q15466 257 aa7.43□□□□□ -1.22
BRCA1-229ENST00000621897 SPATA32Q96LK8 384 aa7.43□□□□□ -1.22
BRCA1-229ENST00000621897 DIRC2Q96SL1 478 aa7.43□□□□□ -1.22
BRCA1-229ENST00000621897 NSUN3Q9H649 340 aaKnown RBP7.43□□□□□ -1.22
BRCA1-229ENST00000621897 PSPNO60542 156 aa7.42□□□□□ -1.22
BRCA1-229ENST00000621897 USP2O75604 605 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-229ENST00000621897 GIPRP48546 466 aa7.42□□□□□ -1.22
BRCA1-229ENST00000621897 EIF6P56537 245 aaKnown RBP7.42□□□□□ -1.22
BRCA1-229ENST00000621897 CRTC3Q6UUV7 619 aa7.42□□□□□ -1.22
BRCA1-229ENST00000621897 LILRA2Q8N149 483 aa7.42□□□□□ -1.22
BRCA1-229ENST00000621897 ANKS4BQ8N8V4 417 aa7.42□□□□□ -1.22
BRCA1-229ENST00000621897 SYTL4Q96C24 671 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-229ENST00000621897 SHISA4Q96DD7 197 aa7.42□□□□□ -1.22
BRCA1-229ENST00000621897 MAP6Q96JE9 813 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms