RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 CRISPLD2Q9H0B8 497 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 HMX1Q9NP08 348 aaPredicted RBP21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 INCENPQ9NQS7 918 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 ADAMTS5Q9UNA0 930 aa21.37■■□□□ 1.01
SCAMP4-213ENST00000621748 F5H6K3 240 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 SLC3A2P08195 630 aaKnown RBP21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 ZKSCAN1P17029 563 aaPredicted RBP21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 CTDSPL2Q05D32 466 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 KLRC3Q07444 240 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 GRB14Q14449 540 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 PLS1Q14651 629 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 ERICH6BQ5W0A0 696 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 TRMT44Q8IYL2 757 aaKnown RBP21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 NEDD1Q8NHV4 660 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 NUP88Q99567 741 aaPredicted RBP21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 MTMR4Q9NYA4 1195 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 TACC3Q9Y6A5 838 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 IVNS1ABPQ9Y6Y0 642 aa21.36■■□□□ 1.01
SCAMP4-213ENST00000621748 NDUFB10O96000 172 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 TSPY3P0CV98 308 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 TSPY8P0CW00 308 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 PRKAR2AP13861 404 aaKnown RBP21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 ERCC3P19447 782 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 TFAP4Q01664 338 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 CACNB2Q08289 660 aaPredicted RBP21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 TMEM132BQ14DG7 1078 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 ALX1Q15699 326 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 ZNF589Q86UQ0 364 aaPredicted RBP21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 SHCBP1Q8NEM2 672 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 MKL1Q969V6 931 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 FLRT1Q9NZU1 646 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 CEP290O15078 2479 aa21.35■■□□□ 1.01
SCAMP4-213ENST00000621748 FARP2O94887 1054 aaPredicted RBP21.34■■□□□ 1.01
SCAMP4-213ENST00000621748 SDSP20132 328 aa21.34■■□□□ 1.01
SCAMP4-213ENST00000621748 NPLOC4Q8TAT6 608 aa21.34■■□□□ 1.01
SCAMP4-213ENST00000621748 ANAPC4Q9UJX5 808 aa21.34■■□□□ 1.01
SCAMP4-213ENST00000621748 PPP1R9AQ9ULJ8 1098 aa21.34■■□□□ 1.01
SCAMP4-213ENST00000621748 PLIN4Q96Q06 1357 aa21.34■■□□□ 1.01
SCAMP4-213ENST00000621748 ZNFX1Q9P2E3 1918 aaKnown RBP21.33■■□□□ 1.01
SCAMP4-213ENST00000621748 VWA5AO00534 786 aa21.33■■□□□ 1.01
SCAMP4-213ENST00000621748 TTLL1O95922 423 aa21.33■■□□□ 1.01
SCAMP4-213ENST00000621748 FGAP02671 866 aa21.33■■□□□ 1.01
SCAMP4-213ENST00000621748 HOXC6P09630 235 aa21.33■■□□□ 1.01
SCAMP4-213ENST00000621748 HSPD1P10809 573 aaKnown RBP21.33■■□□□ 1.01
SCAMP4-213ENST00000621748 STRNO43815 780 aa21.32■■□□□ 1
SCAMP4-213ENST00000621748 CAPN2P17655 700 aa21.32■■□□□ 1
SCAMP4-213ENST00000621748 ADORA2AP29274 412 aa21.32■■□□□ 1
SCAMP4-213ENST00000621748 NCAPG2Q86XI2 1143 aa21.32■■□□□ 1
SCAMP4-213ENST00000621748 LRRC47Q8N1G4 583 aaKnown RBP21.32■■□□□ 1
SCAMP4-213ENST00000621748 REPS2Q8NFH8 660 aa21.32■■□□□ 1
SCAMP4-213ENST00000621748 MROH8Q9H579 483 aa21.32■■□□□ 1
SCAMP4-213ENST00000621748 CCND3P30281 292 aaPredicted RBP21.31■■□□□ 1
SCAMP4-213ENST00000621748 ZNF214Q9UL59 606 aaPredicted RBP21.31■■□□□ 1
SCAMP4-213ENST00000621748 CCDC171Q6TFL3 1326 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 ZNF236Q9UL36 1845 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 COBLO75128 1261 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 IGHA2P01877 340 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 FGRP09769 529 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 PDE4AP27815 886 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 DPP9Q86TI2 863 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 GMCL1P1Q8NEA9 526 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 DIS3LQ8TF46 1054 aaKnown RBP21.3■■□□□ 1
SCAMP4-213ENST00000621748 DPF3Q92784 378 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 SLF1Q9BQI6 1058 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 IL17RBQ9NRM6 502 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 SYNPO2Q9UMS6 1093 aa21.3■■□□□ 1
SCAMP4-213ENST00000621748 TSPY2A6NKD2 308 aa21.29■■□□□ 1
SCAMP4-213ENST00000621748 NMT2O60551 498 aa21.29■■□□□ 1
SCAMP4-213ENST00000621748 SLC25A27O95847 323 aa21.29■■□□□ 1
SCAMP4-213ENST00000621748 STAT3P40763 770 aa21.29■■□□□ 1
SCAMP4-213ENST00000621748 MFSD14CQ5VZR4 134 aa21.29■■□□□ 1
SCAMP4-213ENST00000621748 SLFN13Q68D06 897 aa21.29■■□□□ 1
SCAMP4-213ENST00000621748 RIOX2Q8IUF8 465 aa21.29■■□□□ 1
SCAMP4-213ENST00000621748 ABRAQ8N0Z2 381 aa21.29■■□□□ 1
SCAMP4-213ENST00000621748 PAWRQ96IZ0 340 aaKnown RBP21.29■■□□□ 1
SCAMP4-213ENST00000621748 OGDHLQ9ULD0 1010 aa21.29■■□□□ 1
SCAMP4-213ENST00000621748 ORC4O43929 436 aa21.28■■□□□ 1
SCAMP4-213ENST00000621748 RANBP6O60518 1105 aaKnown RBP21.28■■□□□ 1
SCAMP4-213ENST00000621748 CYP2C19P33261 490 aa21.28■■□□□ 1
SCAMP4-213ENST00000621748 MNX1P50219 401 aaPredicted RBP21.28■■□□□ 1
SCAMP4-213ENST00000621748 LHX8Q68G74 356 aa21.28■■□□□ 1
SCAMP4-213ENST00000621748 CWC27Q6UX04 472 aaKnown RBP21.28■■□□□ 1
SCAMP4-213ENST00000621748 PRPF38AQ8NAV1 312 aaKnown RBP21.28■■□□□ 1
SCAMP4-213ENST00000621748 CCDC136Q96JN2 1154 aa21.28■■□□□ 1
SCAMP4-213ENST00000621748 HTATIP2Q9BUP3 242 aa21.28■■□□□ 1
SCAMP4-213ENST00000621748 ZMYM6O95789 1325 aa21.28■■□□□ 1
SCAMP4-213ENST00000621748 H0YGN5 161 aa21.27■■□□□ 1
SCAMP4-213ENST00000621748 FCER1AP12319 257 aa21.27■■□□□ 1
SCAMP4-213ENST00000621748 HAND2P61296 217 aa21.27■■□□□ 1
SCAMP4-213ENST00000621748 ANKLE1Q8NAG6 615 aa21.27■■□□□ 1
SCAMP4-213ENST00000621748 STX8Q9UNK0 236 aa21.27■■□□□ 1
SCAMP4-213ENST00000621748 BMP3P12645 472 aa21.26■□□□□ 0.99
SCAMP4-213ENST00000621748 OLFML2BQ68BL8 750 aa21.26■□□□□ 0.99
SCAMP4-213ENST00000621748 NECAB2Q7Z6G3 386 aa21.26■□□□□ 0.99
SCAMP4-213ENST00000621748 TRPV1Q8NER1 839 aa21.26■□□□□ 0.99
SCAMP4-213ENST00000621748 KIFC2Q96AC6 838 aa21.26■□□□□ 0.99
SCAMP4-213ENST00000621748 CHMP4CQ96CF2 233 aa21.26■□□□□ 0.99
SCAMP4-213ENST00000621748 NBPF3Q9H094 633 aa21.26■□□□□ 0.99
SCAMP4-213ENST00000621748 DIAPH3Q9NSV4 1193 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms