RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 TTLL12Q14166 644 aaPredicted RBP18.87■□□□□ 0.61
SNAP47-213ENST00000617596 PPP4R3BQ5MIZ7 849 aa18.87■□□□□ 0.61
SNAP47-213ENST00000617596 SLFN13Q68D06 897 aa18.87■□□□□ 0.61
SNAP47-213ENST00000617596 OTUD7BQ6GQQ9 843 aa18.87■□□□□ 0.61
SNAP47-213ENST00000617596 TTBK2Q6IQ55 1244 aa18.87■□□□□ 0.61
SNAP47-213ENST00000617596 ARHGEF10LQ9HCE6 1279 aa18.87■□□□□ 0.61
SNAP47-213ENST00000617596 V9GY48 417 aaPredicted RBP18.87■□□□□ 0.61
SNAP47-213ENST00000617596 MYH4Q9Y623 1939 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 VPS37CA5D8V6 355 aaPredicted RBP18.86■□□□□ 0.61
SNAP47-213ENST00000617596 FMNL1O95466 1100 aaPredicted RBP18.86■□□□□ 0.61
SNAP47-213ENST00000617596 NDUFB10O96000 172 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 SNHG28P0DPA3 235 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 PPP2R5BQ15173 497 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 CCDC96Q2M329 555 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.86■□□□□ 0.61
SNAP47-213ENST00000617596 TMX2Q9Y320 296 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 CYTH3O43739 400 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 STX6O43752 255 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 SLC16A2P36021 539 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 VGLL4Q14135 290 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 LDHDQ86WU2 507 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 MAP3K14Q99558 947 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 VAT1LQ9HCJ6 419 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 PICK1Q9NRD5 415 aa18.86■□□□□ 0.61
SNAP47-213ENST00000617596 CNTNAP5Q8WYK1 1306 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 BAZ2BQ9UIF8 2168 aaKnown RBP18.85■□□□□ 0.61
SNAP47-213ENST00000617596 ESPNB1AK53 854 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 PTPRAP18433 802 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 NF2P35240 595 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 SLC1A4P43007 532 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 TERF1P54274 439 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 ZNF543Q08ER8 600 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 CNKSR2Q8WXI2 1034 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 FEZ1Q99689 392 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 CIZ1Q9ULV3 898 aaPredicted RBP18.85■□□□□ 0.61
SNAP47-213ENST00000617596 ZHX2Q9Y6X8 837 aa18.85■□□□□ 0.61
SNAP47-213ENST00000617596 MAP3K9P80192 1104 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 TRIM22Q8IYM9 498 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 GMCL1P1Q8NEA9 526 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 CLMNQ96JQ2 1002 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 ALG1Q9BT22 464 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 PDCL3Q9H2J4 239 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 ATAD5Q96QE3 1844 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 TRIM75PA6NK02 468 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 SPP2Q13103 211 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 FOXD4L6Q3SYB3 417 aaPredicted RBP18.84■□□□□ 0.61
SNAP47-213ENST00000617596 FOXD4L3Q6VB84 417 aaPredicted RBP18.84■□□□□ 0.61
SNAP47-213ENST00000617596 MTMR6Q9Y217 621 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 SNCAIPQ9Y6H5 919 aa18.84■□□□□ 0.61
SNAP47-213ENST00000617596 BRD1O95696 1058 aa18.83■□□□□ 0.6
SNAP47-213ENST00000617596 IREB2P48200 963 aaKnown RBP18.83■□□□□ 0.6
SNAP47-213ENST00000617596 NUCB2P80303 420 aa18.83■□□□□ 0.6
SNAP47-213ENST00000617596 MTMR2Q13614 643 aa18.83■□□□□ 0.6
SNAP47-213ENST00000617596 PKN1Q16512 942 aa18.83■□□□□ 0.6
SNAP47-213ENST00000617596 FERMT3Q86UX7 667 aa18.83■□□□□ 0.6
SNAP47-213ENST00000617596 RNF26Q9BY78 433 aaPredicted RBP18.83■□□□□ 0.6
SNAP47-213ENST00000617596 AKAP17AQ02040 695 aaKnown RBP18.82■□□□□ 0.6
SNAP47-213ENST00000617596 ASPRV1Q53RT3 343 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 HOMER1Q86YM7 354 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 VCPKMTQ9H867 229 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 STK36Q9NRP7 1315 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 H3BQV1 296 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 PRPF3O43395 683 aaKnown RBP18.82■□□□□ 0.6
SNAP47-213ENST00000617596 TRAK2O60296 914 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 DEXIO95424 95 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 PDCP20941 246 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 GNAQP50148 359 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 FAM83BQ5T0W9 1011 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 IFFO2Q5TF58 517 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 DCAF4Q8WV16 495 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 TNPO1Q92973 898 aaKnown RBP18.82■□□□□ 0.6
SNAP47-213ENST00000617596 SHISA4Q96DD7 197 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 C8orf76Q96K31 380 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 ELP3Q9H9T3 547 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 GRPEL1Q9HAV7 217 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 GOPCQ9HD26 462 aa18.82■□□□□ 0.6
SNAP47-213ENST00000617596 NOL9Q5SY16 702 aaKnown RBP18.81■□□□□ 0.6
SNAP47-213ENST00000617596 GMCL1Q96IK5 515 aa18.81■□□□□ 0.6
SNAP47-213ENST00000617596 GPBP1L1Q9HC44 474 aaPredicted RBP18.81■□□□□ 0.6
SNAP47-213ENST00000617596 GINM1Q9NU53 330 aa18.81■□□□□ 0.6
SNAP47-213ENST00000617596 KIF3AQ9Y496 699 aa18.81■□□□□ 0.6
SNAP47-213ENST00000617596 CSADQ9Y600 493 aa18.81■□□□□ 0.6
SNAP47-213ENST00000617596 TMEM232C9JQI7 657 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 ZSCAN22P10073 491 aaPredicted RBP18.8■□□□□ 0.6
SNAP47-213ENST00000617596 BMP3P12645 472 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 DOCK1Q14185 1865 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 SAMD1Q6SPF0 538 aaPredicted RBP18.8■□□□□ 0.6
SNAP47-213ENST00000617596 ZNF280CQ8ND82 737 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 GPKOWQ92917 476 aaPredicted RBP eCLIP18.8■□□□□ 0.6
SNAP47-213ENST00000617596 PIGSQ96S52 555 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 SH2D4AQ9H788 454 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 VPS54Q9P1Q0 977 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 USP17L10C9JJH3 530 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 SNAP25P60880 206 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 IKQ13123 557 aaPredicted RBP18.8■□□□□ 0.6
SNAP47-213ENST00000617596 GPATCH4Q5T3I0 446 aaKnown RBP18.8■□□□□ 0.6
SNAP47-213ENST00000617596 ADGRF4Q8IZF3 695 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 LZTS2Q9BRK4 669 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 EMILIN3Q9NT22 766 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms