RNA–Protein interactions for RNA: ENST00000617558.2

AL662899.3-202, humanhuman

TSL 1 (best) BASIC

Gene AL662899.3, Length 991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662899.3-202ENST00000617558 MCM2P49736 904 aa13.62□□□□□ -0.23
AL662899.3-202ENST00000617558 VEGFBP49765 207 aa13.62□□□□□ -0.23
AL662899.3-202ENST00000617558 AK2P54819 239 aa13.62□□□□□ -0.23
AL662899.3-202ENST00000617558 ATP2B2Q01814 1243 aa13.62□□□□□ -0.23
AL662899.3-202ENST00000617558 PABPC4Q13310 644 aaKnown RBP eCLIP13.62□□□□□ -0.239e-33■■■□□ 15.1
AL662899.3-202ENST00000617558 SLFN13Q68D06 897 aa13.62□□□□□ -0.23
AL662899.3-202ENST00000617558 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
AL662899.3-202ENST00000617558 KLF18A0A0U1RQI7 1052 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 PALM3A6NDB9 673 aaPredicted RBP13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 USP17L15C9J2P7 530 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 BTBD19C9JJ37 291 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 USP17L13C9JLJ4 530 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 USP17L11C9JVI0 530 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 USP17L18D6R9N7 530 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 USP17L22D6RA61 530 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 USP17L17D6RBQ6 530 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 USP17L19D6RCP7 530 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 USP17L20D6RJB6 530 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 BMP3P12645 472 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 SLC1A4P43007 532 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 FGD1P98174 961 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 USP17L24Q0WX57 530 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 TREML2Q5T2D2 321 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 DNAJC5GQ8N7S2 189 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 PTPN18Q99952 460 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 MAD2L2Q9UI95 211 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 ADAMTS5Q9UNA0 930 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 ADGRA2Q96PE1 1338 aa13.61□□□□□ -0.23
AL662899.3-202ENST00000617558 MYH6P13533 1939 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 COL11A1P12107 1806 aaPredicted RBP13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 GOLGA8BA8MQT2 603 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 IGF2BP3O00425 579 aaKnown RBP eCLIP13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 ZBTB43O43298 467 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 ALDH1A1P00352 501 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 FDX1P10109 184 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 PDIA3P30101 505 aaKnown RBP13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 STAT2P52630 851 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 KIF23Q02241 960 aaPredicted RBP13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 APOBRQ0VD83 1088 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 FAM83BQ5T0W9 1011 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 NFXL1Q6ZNB6 911 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 CATSPERGQ6ZRH7 1159 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 FAM160B2Q86V87 743 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 IFNL1Q8IU54 200 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 SPICE1Q8N0Z3 855 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 FANCBQ8NB91 859 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 GTF3C2Q8WUA4 911 aaPredicted RBP13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 SNX21Q969T3 373 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 LZTS2Q9BRK4 669 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 SPZ1Q9BXG8 430 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 RPAP3Q9H6T3 665 aaPredicted RBP13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 SH2B1Q9NRF2 756 aaPredicted RBP13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 RBM28Q9NW13 759 aaKnown RBP13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 FEM1BQ9UK73 627 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 PNMA3Q9UL41 463 aa13.6□□□□□ -0.23
AL662899.3-202ENST00000617558 HTTP42858 3142 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 CCDC196A0A1B0GTZ2 297 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 PFKFB2O60825 505 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 PARP1P09874 1014 aaKnown RBP13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 GNAQP50148 359 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 HTRA3P83110 453 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 FUT2Q10981 343 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 DGKZQ13574 1117 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 SYNE3Q6ZMZ3 975 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 GADL1Q6ZQY3 521 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 RASGRP2Q7LDG7 609 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 FAM43AQ8N2R8 423 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 MB21D1Q8N884 522 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 CHURC1Q8WUH1 139 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 MTMR8Q96EF0 704 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 ZIC5Q96T25 663 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 ASCC2Q9H1I8 757 aaPredicted RBP13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 FAM217BQ9NTX9 383 aaPredicted RBP13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 PPP1R9AQ9ULJ8 1098 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 TPCN1Q9ULQ1 816 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 LIMCH1Q9UPQ0 1083 aa13.59□□□□□ -0.23
AL662899.3-202ENST00000617558 SPDYE16A6NNV3 312 aaPredicted RBP13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 PDHXO00330 501 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 CD2BP2O95400 341 aaKnown RBP13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 COG2Q14746 738 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 RTN1Q16799 776 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 TMTC3Q6ZXV5 915 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 PRPF38AQ8NAV1 312 aaKnown RBP13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 GTF3C6Q969F1 213 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 PARK7Q99497 189 aaKnown RBP13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 NUP88Q99567 741 aaPredicted RBP13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 SLF1Q9BQI6 1058 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 RIOX1Q9H6W3 641 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 SAGE1Q9NXZ1 904 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 HOXC10Q9NYD6 342 aa13.58□□□□□ -0.24
AL662899.3-202ENST00000617558 GOLGA8AA7E2F4 631 aa13.57□□□□□ -0.24
AL662899.3-202ENST00000617558 KLRF2D3W0D1 207 aa13.57□□□□□ -0.24
AL662899.3-202ENST00000617558 AOC2O75106 756 aa13.57□□□□□ -0.24
AL662899.3-202ENST00000617558 DSG3P32926 999 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms