RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 OTOP1Q7RTM1 612 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 ANKRD23Q86SG2 305 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 MICU3Q86XE3 530 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 IQCA1Q86XH1 822 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 LRRC47Q8N1G4 583 aaKnown RBP9.41□□□□□ -0.9
PCDH9-205ENST00000614931 SPRYD3Q8NCJ5 442 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 CD99L2Q8TCZ2 262 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 ZNF274Q96GC6 653 aaPredicted RBP9.41□□□□□ -0.9
PCDH9-205ENST00000614931 FAM217BQ9NTX9 383 aaPredicted RBP9.41□□□□□ -0.9
PCDH9-205ENST00000614931 TRIM17Q9Y577 477 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 RLFQ13129 1914 aa9.41□□□□□ -0.9
PCDH9-205ENST00000614931 LOC285556D6RIA3 1793 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 SMCHD1A6NHR9 2005 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 A0A1W2PRG0 241 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 ERICH2A1L162 156 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 CCDC69A6NI79 296 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 GOLGA8AA7E2F4 631 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 CTDNEP1O95476 244 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 MLLT1Q03111 559 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-205ENST00000614931 TROAPQ12815 778 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 SART3Q15020 963 aaKnown RBP9.4□□□□□ -0.9
PCDH9-205ENST00000614931 NFXL1Q6ZNB6 911 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 DGKHQ86XP1 1220 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 CCDC144CPQ8IYA2 1237 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 IL27Q8NEV9 243 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 ACER1Q8TDN7 264 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 CHMP4CQ96CF2 233 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 ZSCAN31Q96LW9 406 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-205ENST00000614931 PICK1Q9NRD5 415 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 SH2B1Q9NRF2 756 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-205ENST00000614931 CLIP2Q9UDT6 1046 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 NAP1L2Q9ULW6 460 aaPredicted RBP9.4□□□□□ -0.9
PCDH9-205ENST00000614931 PTPN22Q9Y2R2 807 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 AFG3L2Q9Y4W6 797 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 MYH15Q9Y2K3 1946 aa9.4□□□□□ -0.9
PCDH9-205ENST00000614931 ADGRA2Q96PE1 1338 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 A0A0G2JLL6 359 aaPredicted RBP9.39□□□□□ -0.91
PCDH9-205ENST00000614931 PDHXO00330 501 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 ZBTB43O43298 467 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 JAK2O60674 1132 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 PPFIA3O75145 1194 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 DDAH1O94760 285 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 TOP1P11387 765 aaKnown RBP9.39□□□□□ -0.91
PCDH9-205ENST00000614931 EEF2P13639 858 aaKnown RBP9.39□□□□□ -0.91
PCDH9-205ENST00000614931 SOX10P56693 466 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 ICA1Q05084 483 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 RAB3GAP1Q15042 981 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 SLC35G1Q2M3R5 365 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 CCDC178Q5BJE1 867 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 KIAA1755Q5JYT7 1200 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 GPAT2Q6NUI2 795 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 PRRT2Q7Z6L0 340 aaPredicted RBP9.39□□□□□ -0.91
PCDH9-205ENST00000614931 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 SLKQ9H2G2 1235 aaPredicted RBP9.39□□□□□ -0.91
PCDH9-205ENST00000614931 KAT14Q9H8E8 782 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 EFCC1Q9HA90 598 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 NYAP2Q9P242 653 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 STX8Q9UNK0 236 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 SLC12A7Q9Y666 1083 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 ZHX2Q9Y6X8 837 aa9.39□□□□□ -0.91
PCDH9-205ENST00000614931 COL11A1P12107 1806 aaPredicted RBP9.39□□□□□ -0.91
PCDH9-205ENST00000614931 PLEKHA8P1O95397 391 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 TTLL1O95922 423 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 ADD1P35611 737 aaKnown RBP9.38□□□□□ -0.91
PCDH9-205ENST00000614931 DDIT3P35638 169 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 METAP2P50579 478 aaKnown RBP eCLIP9.38□□□□□ -0.91
PCDH9-205ENST00000614931 ATP2B2Q01814 1243 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 GRM4Q14833 912 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 ARHGEF6Q15052 776 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 NTRK3Q16288 839 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 RTN1Q16799 776 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 C17orf99Q6UX52 265 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 FASTKD5Q7L8L6 764 aaKnown RBP9.38□□□□□ -0.91
PCDH9-205ENST00000614931 TMTC2Q8N394 836 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 STAG2Q8N3U4 1231 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 NSUN7Q8NE18 718 aaKnown RBP9.38□□□□□ -0.91
PCDH9-205ENST00000614931 NUP133Q8WUM0 1156 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 KANSL2Q9H9L4 492 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 CABP5Q9NP86 173 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 MTMR7Q9Y216 660 aa9.38□□□□□ -0.91
PCDH9-205ENST00000614931 CNTNAP5Q8WYK1 1306 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 ASNSP08243 561 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 RCAN1P53805 252 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 LACTBP83111 547 aaPredicted RBP9.37□□□□□ -0.91
PCDH9-205ENST00000614931 FUT2Q10981 343 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 CATIPQ7Z7H3 387 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 NBPF11Q86T75 865 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 CMTR1Q8N1G2 835 aaKnown RBP9.37□□□□□ -0.91
PCDH9-205ENST00000614931 SMARCC2Q8TAQ2 1214 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 MKL1Q969V6 931 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 CPVLQ9H3G5 476 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 MAD2L2Q9UI95 211 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 SLC45A1Q9Y2W3 748 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 TCHHQ07283 1943 aa9.37□□□□□ -0.91
PCDH9-205ENST00000614931 FRMPD2Q68DX3 1309 aaPredicted RBP9.36□□□□□ -0.91
PCDH9-205ENST00000614931 ZSWIM8A7E2V4 1837 aa9.36□□□□□ -0.91
PCDH9-205ENST00000614931 PTPDC1A2A3K4 754 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms