RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 MRVI1Q9Y6F6 885 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 BRCA1P38398 1863 aaKnown RBP11.38□□□□□ -0.59
GGA3-221ENST00000614198 ECM29Q5VYK3 1845 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 FRMPD2Q68DX3 1309 aaPredicted RBP11.38□□□□□ -0.59
GGA3-221ENST00000614198 HHIPL2Q6UWX4 724 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 NYAP1Q6ZVC0 841 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 TMEM47Q9BQJ4 181 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 NUP62CLQ9H1M0 184 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 GOLGA6L19H0YKK7 550 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 ORC4O43929 436 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 NR5A1Q13285 461 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 MAP3K11Q16584 847 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 MUM1L1Q5H9M0 696 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 ARHGAP27Q6ZUM4 889 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 C16orf86Q6ZW13 317 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 VAT1LQ9HCJ6 419 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 ZNRF3Q9ULT6 936 aa11.38□□□□□ -0.59
GGA3-221ENST00000614198 H2AFXP16104 143 aaPredicted RBP11.37□□□□□ -0.59
GGA3-221ENST00000614198 ATP2B1P20020 1258 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 SHMT1P34896 483 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 TYRO3Q06418 890 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 PNMA1Q8ND90 353 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 VIL1P09327 827 aaKnown RBP11.37□□□□□ -0.59
GGA3-221ENST00000614198 PTPN14Q15678 1187 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 TBC1D10BQ4KMP7 808 aaPredicted RBP11.37□□□□□ -0.59
GGA3-221ENST00000614198 EARS2Q5JPH6 523 aaKnown RBP11.37□□□□□ -0.59
GGA3-221ENST00000614198 SYNE3Q6ZMZ3 975 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 CNPY4Q8N129 248 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 CRACR2BQ8N4Y2 399 aaPredicted RBP11.37□□□□□ -0.59
GGA3-221ENST00000614198 GPKOWQ92917 476 aaPredicted RBP eCLIP11.37□□□□□ -0.59
GGA3-221ENST00000614198 USP28Q96RU2 1077 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 GMLQ99445 158 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 UBA5Q9GZZ9 404 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 WDR19Q8NEZ3 1342 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 ZNF541Q9H0D2 1346 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 SLU7O95391 586 aaKnown RBP11.37□□□□□ -0.59
GGA3-221ENST00000614198 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
GGA3-221ENST00000614198 ANO6Q4KMQ2 910 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 KRT40Q6A162 431 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 LLPHQ9BRT6 129 aaKnown RBP11.37□□□□□ -0.59
GGA3-221ENST00000614198 CBX8Q9HC52 389 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 CLIP2Q9UDT6 1046 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 SERPINB13Q9UIV8 391 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 FHOD1Q9Y613 1164 aa11.37□□□□□ -0.59
GGA3-221ENST00000614198 BTBD18B2RXH4 712 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 SLC3A2P08195 630 aaKnown RBP11.36□□□□□ -0.59
GGA3-221ENST00000614198 CDC25BP30305 580 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 PKN1Q16512 942 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 CATIPQ7Z7H3 387 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 FBXO18Q8NFZ0 1043 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 CLIC4Q9Y696 253 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 USP17L5A8MUK1 530 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 NEMFO60524 1076 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 GABPAQ06546 454 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 FUT2Q10981 343 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 AMOTL1Q8IY63 956 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 SUPT20HQ8NEM7 779 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 JDP2Q8WYK2 163 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 KAT14Q9H8E8 782 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 FOCADQ5VW36 1801 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 FER1L6Q2WGJ9 1857 aa11.36□□□□□ -0.59
GGA3-221ENST00000614198 SPDYE2BA6NHP3 402 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 BECN2A8MW95 431 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 WNT7AO00755 349 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 CYTH3O43739 400 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 SPDYE6P0CI01 402 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 PLCG2P16885 1265 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 SSRP1Q08945 709 aaKnown RBP11.35□□□□□ -0.59
GGA3-221ENST00000614198 EP400NLQ6ZTU2 488 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 TXLNBQ8N3L3 684 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 RASSF4Q9H2L5 321 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 GEMIN8Q9NWZ8 242 aaKnown RBP11.35□□□□□ -0.59
GGA3-221ENST00000614198 SIPA1L1O43166 1804 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 WNT10BO00744 389 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 YBX3P16989 372 aaKnown RBP eCLIP11.35□□□□□ -0.594e-6■□□□□ 8.3
GGA3-221ENST00000614198 SNAP25P60880 206 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 DGKZQ13574 1117 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 HOMER1Q86YM7 354 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 ERCC4Q92889 916 aaPredicted RBP11.35□□□□□ -0.59
GGA3-221ENST00000614198 PGBD1Q96JS3 809 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 A0A087WWV3 80 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 PDCP20941 246 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 SLC16A2P36021 539 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 NOP2P46087 812 aaKnown RBP11.35□□□□□ -0.59
GGA3-221ENST00000614198 DLGAP5Q15398 846 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 TEX35Q5T0J7 233 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 CSRNP1Q96S65 589 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 DACT1Q9NYF0 836 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 RSPH14Q9UHP6 348 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 MAD2L2Q9UI95 211 aa11.35□□□□□ -0.59
GGA3-221ENST00000614198 LOC102724159A0A0B4J2E5 919 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 LIG1P18858 919 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 PWP2Q15269 919 aaKnown RBP11.34□□□□□ -0.59
GGA3-221ENST00000614198 CCDC144BQ3MJ40 725 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 TTBK2Q6IQ55 1244 aa11.34□□□□□ -0.59
GGA3-221ENST00000614198 TYW1BQ6NUM6 668 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms