RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 BTBD19C9JJ37 291 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 PPFIA3O75145 1194 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 DDAH1O94760 285 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 GH2P01242 217 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 TOP1P11387 765 aaKnown RBP9.77□□□□□ -0.85
PSMB3-208ENST00000613870 CETPP11597 493 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 GJB2P29033 226 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 FOSBP53539 338 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 AKAP17AQ02040 695 aaKnown RBP9.77□□□□□ -0.85
PSMB3-208ENST00000613870 SNAPC2Q13487 334 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 MOGSQ13724 837 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 TAF1CQ15572 869 aaPredicted RBP9.77□□□□□ -0.85
PSMB3-208ENST00000613870 FOXD4L5Q5VV16 416 aaPredicted RBP9.77□□□□□ -0.85
PSMB3-208ENST00000613870 TMEM179Q6ZVK1 233 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 SGMS1Q86VZ5 419 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 DGKHQ86XP1 1220 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 LRRC47Q8N1G4 583 aaKnown RBP9.77□□□□□ -0.85
PSMB3-208ENST00000613870 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 CD99L2Q8TCZ2 262 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 FOXD4L4Q8WXT5 416 aaPredicted RBP9.77□□□□□ -0.85
PSMB3-208ENST00000613870 TMEM47Q9BQJ4 181 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 DNAJC18Q9H819 358 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 IL17RBQ9NRM6 502 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 CHMP5Q9NZZ3 219 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 KCNH4Q9UQ05 1017 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 FOCADQ5VW36 1801 aa9.77□□□□□ -0.85
PSMB3-208ENST00000613870 DDX60LQ5H9U9 1706 aaKnown RBP9.76□□□□□ -0.85
PSMB3-208ENST00000613870 PTPRFP10586 1907 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 PTPDC1A2A3K4 754 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 TBC1D12O60347 775 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 JAK2O60674 1132 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 TTLL1O95922 423 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 KIF5BP33176 963 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 ADD1P35611 737 aaKnown RBP9.76□□□□□ -0.85
PSMB3-208ENST00000613870 EVCP57679 992 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 SP3Q02447 781 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 ICA1Q05084 483 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 SSRP1Q08945 709 aaKnown RBP9.76□□□□□ -0.85
PSMB3-208ENST00000613870 SEPT2Q15019 361 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 TATDN1Q6P1N9 297 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 FBXO46Q6PJ61 603 aaPredicted RBP9.76□□□□□ -0.85
PSMB3-208ENST00000613870 OTOP1Q7RTM1 612 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 CLEC10AQ8IUN9 316 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 TRIM22Q8IYM9 498 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 CCDC82Q8N4S0 544 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 FANCBQ8NB91 859 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 LLPHQ9BRT6 129 aaKnown RBP9.76□□□□□ -0.85
PSMB3-208ENST00000613870 KANSL2Q9H9L4 492 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 ZFYVE28Q9HCC9 887 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 PICK1Q9NRD5 415 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 RBM28Q9NW13 759 aaKnown RBP9.76□□□□□ -0.85
PSMB3-208ENST00000613870 MTMR4Q9NYA4 1195 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 TRIM17Q9Y577 477 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 SIPA1L1O43166 1804 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 DOCK1Q14185 1865 aa9.76□□□□□ -0.85
PSMB3-208ENST00000613870 VPS37CA5D8V6 355 aaPredicted RBP9.75□□□□□ -0.85
PSMB3-208ENST00000613870 H3BQV1 296 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 TLR2O60603 784 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 EEF2P13639 858 aaKnown RBP9.75□□□□□ -0.85
PSMB3-208ENST00000613870 PTPRAP18433 802 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 PDCP20941 246 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 NUCB2P80303 420 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 HMGN5P82970 282 aaKnown RBP9.75□□□□□ -0.85
PSMB3-208ENST00000613870 CCDC96Q2M329 555 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 SHROOM1Q2M3G4 852 aaPredicted RBP9.75□□□□□ -0.85
PSMB3-208ENST00000613870 METTL16Q86W50 562 aaKnown RBP9.75□□□□□ -0.85
PSMB3-208ENST00000613870 SCYL3Q8IZE3 742 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 PIBF1Q8WXW3 757 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 ANKS1AQ92625 1134 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 ERO1AQ96HE7 468 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 SLC26A6Q9BXS9 759 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 ARHGEF10LQ9HCE6 1279 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 ZCCHC17Q9NP64 241 aaKnown RBP9.75□□□□□ -0.85
PSMB3-208ENST00000613870 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.75□□□□□ -0.85
PSMB3-208ENST00000613870 ORC3Q9UBD5 711 aaPredicted RBP9.75□□□□□ -0.85
PSMB3-208ENST00000613870 ZBTB21Q9ULJ3 1066 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 CIZ1Q9ULV3 898 aaPredicted RBP9.75□□□□□ -0.85
PSMB3-208ENST00000613870 AFG3L2Q9Y4W6 797 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 ZHX2Q9Y6X8 837 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 ZSWIM8A7E2V4 1837 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 ATAD5Q96QE3 1844 aa9.75□□□□□ -0.85
PSMB3-208ENST00000613870 MKI67P46013 3256 aaKnown RBP9.74□□□□□ -0.85
PSMB3-208ENST00000613870 CXCL11O14625 94 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 CTNND1O60716 968 aaKnown RBP9.74□□□□□ -0.85
PSMB3-208ENST00000613870 PARP1P09874 1014 aaKnown RBP9.74□□□□□ -0.85
PSMB3-208ENST00000613870 CDC27P30260 824 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 CAP2P40123 477 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 GNAQP50148 359 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 SOX10P56693 466 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 ST3GAL1Q11201 340 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 IKQ13123 557 aaPredicted RBP9.74□□□□□ -0.85
PSMB3-208ENST00000613870 TRIM29Q14134 588 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 RRP1BQ14684 758 aaKnown RBP9.74□□□□□ -0.85
PSMB3-208ENST00000613870 PPP2R5BQ15173 497 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 LARP1BQ659C4 914 aaKnown RBP9.74□□□□□ -0.85
PSMB3-208ENST00000613870 RCSD1Q6JBY9 416 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 GPAT2Q6NUI2 795 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 ANKRD23Q86SG2 305 aa9.74□□□□□ -0.85
PSMB3-208ENST00000613870 CCDC84Q86UT8 332 aaPredicted RBP9.74□□□□□ -0.85
PSMB3-208ENST00000613870 NSUN7Q8NE18 718 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms