RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MTMR7Q9Y216 660 aa15.55■□□□□ 0.08
MDC1-209ENST00000613547 WDR19Q8NEZ3 1342 aa15.54■□□□□ 0.08
MDC1-209ENST00000613547 LBX1P52954 281 aa15.54■□□□□ 0.08
MDC1-209ENST00000613547 ANTXR2P58335 489 aa15.54■□□□□ 0.08
MDC1-209ENST00000613547 SP3Q02447 781 aa15.54■□□□□ 0.08
MDC1-209ENST00000613547 IKQ13123 557 aaPredicted RBP15.54■□□□□ 0.08
MDC1-209ENST00000613547 KIF22Q14807 665 aa15.54■□□□□ 0.08
MDC1-209ENST00000613547 ARHGEF6Q15052 776 aa15.54■□□□□ 0.08
MDC1-209ENST00000613547 DHX32Q7L7V1 743 aaKnown RBP15.54■□□□□ 0.08
MDC1-209ENST00000613547 NUP88Q99567 741 aaPredicted RBP15.54■□□□□ 0.08
MDC1-209ENST00000613547 UPF2Q9HAU5 1272 aaKnown RBP15.54■□□□□ 0.08
MDC1-209ENST00000613547 FEM1BQ9UK73 627 aa15.54■□□□□ 0.08
MDC1-209ENST00000613547 PTPRFP10586 1907 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 ADGRA2Q96PE1 1338 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 STAT2P52630 851 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 ANAPC15P60006 121 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 FGD1P98174 961 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 SEC23AQ15436 765 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 FAM110CQ1W6H9 321 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 ADCK5Q3MIX3 580 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 BLOC1S2Q6QNY1 142 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
MDC1-209ENST00000613547 C17orf99Q6UX52 265 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 LBX2Q6XYB7 198 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 FAM160B2Q86V87 743 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 MB21D1Q8N884 522 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 CHURC1Q8WUH1 139 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 ZNF296Q8WUU4 475 aaPredicted RBP15.53■□□□□ 0.08
MDC1-209ENST00000613547 ERO1AQ96HE7 468 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 SLF1Q9BQI6 1058 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 R3HDMLQ9H3Y0 253 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 RABGAP1Q9Y3P9 1069 aa15.53■□□□□ 0.08
MDC1-209ENST00000613547 CTDP1Q9Y5B0 961 aaPredicted RBP15.53■□□□□ 0.08
MDC1-209ENST00000613547 CCDC69A6NI79 296 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 SPDYE16A6NNV3 312 aaPredicted RBP15.52■□□□□ 0.08
MDC1-209ENST00000613547 TMEM232C9JQI7 657 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 BCRP11274 1271 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 DSG3P32926 999 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 GPATCH4Q5T3I0 446 aaKnown RBP15.52■□□□□ 0.08
MDC1-209ENST00000613547 NFXL1Q6ZNB6 911 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 CATIPQ7Z7H3 387 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 PIAS4Q8N2W9 510 aaPredicted RBP15.52■□□□□ 0.08
MDC1-209ENST00000613547 ANKRD13CQ8N6S4 541 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 PRPF38AQ8NAV1 312 aaKnown RBP15.52■□□□□ 0.08
MDC1-209ENST00000613547 IGDCC4Q8TDY8 1250 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 PAGR1Q9BTK6 254 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 PRDM10Q9NQV6 1147 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 MORF4L1Q9UBU8 362 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 PPP1R9AQ9ULJ8 1098 aa15.52■□□□□ 0.08
MDC1-209ENST00000613547 SH2B2O14492 632 aaPredicted RBP15.51■□□□□ 0.07
MDC1-209ENST00000613547 SEC24BO95487 1268 aa15.51■□□□□ 0.07
MDC1-209ENST00000613547 FDX1P10109 184 aa15.51■□□□□ 0.07
MDC1-209ENST00000613547 PDHBP11177 359 aa15.51■□□□□ 0.07
MDC1-209ENST00000613547 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
MDC1-209ENST00000613547 LIFRP42702 1097 aa15.51■□□□□ 0.07
MDC1-209ENST00000613547 CCNA1P78396 465 aa15.51■□□□□ 0.07
MDC1-209ENST00000613547 KCTD1Q719H9 257 aa15.51■□□□□ 0.07
MDC1-209ENST00000613547 CCAR1Q8IX12 1150 aaKnown RBP15.51■□□□□ 0.07
MDC1-209ENST00000613547 GPRC5AQ8NFJ5 357 aa15.51■□□□□ 0.07
MDC1-209ENST00000613547 KIFC2Q96AC6 838 aa15.51■□□□□ 0.07
MDC1-209ENST00000613547 CHMP4CQ96CF2 233 aa15.51■□□□□ 0.07
MDC1-209ENST00000613547 PLA2G6O60733 806 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 ZBED4O75132 1171 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 DDAH1O94760 285 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 PARP1P09874 1014 aaKnown RBP15.5■□□□□ 0.07
MDC1-209ENST00000613547 SNHG28P0DPA3 235 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 RPS6KB1P23443 525 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 EXOSC10Q01780 885 aaKnown RBP15.5■□□□□ 0.07
MDC1-209ENST00000613547 ZNF543Q08ER8 600 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 ASPRV1Q53RT3 343 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 SYNE3Q6ZMZ3 975 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 ATG4CQ96DT6 458 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 TM6SF1Q9BZW5 370 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 LY9Q9HBG7 655 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 CWC22Q9HCG8 908 aaKnown RBP15.5■□□□□ 0.07
MDC1-209ENST00000613547 FBXO28Q9NVF7 368 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 RBPJLQ9UBG7 517 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 CYP46A1Q9Y6A2 500 aa15.5■□□□□ 0.07
MDC1-209ENST00000613547 FRMPD2Q68DX3 1309 aaPredicted RBP15.49■□□□□ 0.07
MDC1-209ENST00000613547 VWA5AO00534 786 aa15.49■□□□□ 0.07
MDC1-209ENST00000613547 ERVK-9P63128 1117 aa15.49■□□□□ 0.07
MDC1-209ENST00000613547 ERVK-24P63145 666 aa15.49■□□□□ 0.07
MDC1-209ENST00000613547 LACTBP83111 547 aaPredicted RBP15.49■□□□□ 0.07
MDC1-209ENST00000613547 ZSWIM6Q9HCJ5 1215 aa15.49■□□□□ 0.07
MDC1-209ENST00000613547 GPCPD1Q9NPB8 672 aa15.49■□□□□ 0.07
MDC1-209ENST00000613547 SLC12A7Q9Y666 1083 aa15.49■□□□□ 0.07
MDC1-209ENST00000613547 GNRH1P01148 92 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 CALM1P0DP23 149 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 CALM2P0DP24 149 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 CALM3P0DP25 149 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 KIF5BP33176 963 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 FCGRTP55899 365 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 PLS1Q14651 629 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 RUFY3Q7L099 469 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 RASGRP2Q7LDG7 609 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 SGMS1Q86VZ5 419 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 ZNF654Q8IZM8 581 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 CTCFLQ8NI51 663 aaPredicted RBP15.48■□□□□ 0.07
MDC1-209ENST00000613547 CD99L2Q8TCZ2 262 aa15.48■□□□□ 0.07
MDC1-209ENST00000613547 TCEANC2Q96MN5 208 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms