RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 MTMR4Q9NYA4 1195 aa22.68■■□□□ 1.22
SRRM3-205ENST00000612155 CLIP2Q9UDT6 1046 aa22.68■■□□□ 1.22
SRRM3-205ENST00000612155 IGKV6D-41A0A0C4DH26 115 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 KIF28PB7ZC32 967 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 CTNND1O60716 968 aaKnown RBP22.67■■□□□ 1.22
SRRM3-205ENST00000612155 TOMM70O94826 608 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 WTAPQ15007 396 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 CAMK4Q16566 473 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 TMEM179Q6ZVK1 233 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 LRRC47Q8N1G4 583 aaKnown RBP22.67■■□□□ 1.22
SRRM3-205ENST00000612155 EEF2P13639 858 aaKnown RBP22.67■■□□□ 1.22
SRRM3-205ENST00000612155 ECE1P42892 770 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 DGKZQ13574 1117 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 SMC1BQ8NDV3 1235 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 ACER1Q8TDN7 264 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 ANP32BQ92688 251 aaKnown RBP22.67■■□□□ 1.22
SRRM3-205ENST00000612155 PHKBQ93100 1093 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 ELP3Q9H9T3 547 aa22.67■■□□□ 1.22
SRRM3-205ENST00000612155 GREB1LQ9C091 1923 aaPredicted RBP22.66■■□□□ 1.22
SRRM3-205ENST00000612155 PCNTO95613 3336 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 ERICH2A1L162 156 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 ZBTB43O43298 467 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 RAD21O60216 631 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 IREB2P48200 963 aaKnown RBP22.66■■□□□ 1.22
SRRM3-205ENST00000612155 MAP3K9P80192 1104 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 ICA1Q05084 483 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 ZYXQ15942 572 aaKnown RBP22.66■■□□□ 1.22
SRRM3-205ENST00000612155 IFIT1BQ5T764 474 aaKnown RBP22.66■■□□□ 1.22
SRRM3-205ENST00000612155 NFXL1Q6ZNB6 911 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 GBA2Q9HCG7 927 aaPredicted RBP22.66■■□□□ 1.22
SRRM3-205ENST00000612155 A0A1W2PRG0 241 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 SART3Q15020 963 aaKnown RBP22.66■■□□□ 1.22
SRRM3-205ENST00000612155 SCYL3Q8IZE3 742 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 NUP62CLQ9H1M0 184 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 SNCAIPQ9Y6H5 919 aa22.66■■□□□ 1.22
SRRM3-205ENST00000612155 GOLGA6L4A6NEF3 574 aa22.65■■□□□ 1.22
SRRM3-205ENST00000612155 TMEM47Q9BQJ4 181 aa22.65■■□□□ 1.22
SRRM3-205ENST00000612155 PLIN4Q96Q06 1357 aa22.65■■□□□ 1.22
SRRM3-205ENST00000612155 ASNSP08243 561 aa22.65■■□□□ 1.22
SRRM3-205ENST00000612155 ARMC9Q7Z3E5 817 aa22.65■■□□□ 1.22
SRRM3-205ENST00000612155 GOLPH3LQ9H4A5 285 aa22.65■■□□□ 1.22
SRRM3-205ENST00000612155 TCP11L1Q9NUJ3 509 aa22.65■■□□□ 1.22
SRRM3-205ENST00000612155 PASKQ96RG2 1323 aa22.64■■□□□ 1.22
SRRM3-205ENST00000612155 GOLGA8AA7E2F4 631 aa22.64■■□□□ 1.21
SRRM3-205ENST00000612155 PTPRAP18433 802 aa22.64■■□□□ 1.21
SRRM3-205ENST00000612155 TRIM44Q96DX7 344 aaPredicted RBP22.64■■□□□ 1.21
SRRM3-205ENST00000612155 CLSTN2Q9H4D0 955 aa22.64■■□□□ 1.21
SRRM3-205ENST00000612155 PICK1Q9NRD5 415 aa22.64■■□□□ 1.21
SRRM3-205ENST00000612155 DOCK1Q14185 1865 aa22.64■■□□□ 1.21
SRRM3-205ENST00000612155 ESPNB1AK53 854 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 KIF23Q02241 960 aaPredicted RBP22.63■■□□□ 1.21
SRRM3-205ENST00000612155 RBM43Q6ZSC3 357 aaKnown RBP22.63■■□□□ 1.21
SRRM3-205ENST00000612155 BICD2Q8TD16 824 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 ZNF396Q96N95 335 aaPredicted RBP22.63■■□□□ 1.21
SRRM3-205ENST00000612155 KANSL2Q9H9L4 492 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 CSADQ9Y600 493 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 ZHX2Q9Y6X8 837 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 PAPPA2Q9BXP8 1791 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 MYH4Q9Y623 1939 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 TTLL1O95922 423 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 ATL3Q6DD88 541 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 RBM46Q8TBY0 533 aaKnown RBP22.63■■□□□ 1.21
SRRM3-205ENST00000612155 ALG1Q9BT22 464 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 SLC12A7Q9Y666 1083 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 CLIC4Q9Y696 253 aa22.63■■□□□ 1.21
SRRM3-205ENST00000612155 NID2Q14112 1375 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 CCDC69A6NI79 296 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 MKRN3Q13064 507 aaKnown RBP22.62■■□□□ 1.21
SRRM3-205ENST00000612155 MAP3K11Q16584 847 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 CKAP2LQ8IYA6 745 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 ANKRD13AQ8IZ07 590 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 C2orf69Q8N8R5 385 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 NUP133Q8WUM0 1156 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 TRIM75PA6NK02 468 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 SPICE1Q8N0Z3 855 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 PNMA1Q8ND90 353 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 KAT14Q9H8E8 782 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 DDX19AQ9NUU7 478 aaKnown RBP22.62■■□□□ 1.21
SRRM3-205ENST00000612155 RTEL1Q9NZ71 1219 aa22.62■■□□□ 1.21
SRRM3-205ENST00000612155 TRPM7Q96QT4 1865 aa22.61■■□□□ 1.21
SRRM3-205ENST00000612155 UVSSAQ2YD98 709 aa22.61■■□□□ 1.21
SRRM3-205ENST00000612155 KIAA1755Q5JYT7 1200 aa22.61■■□□□ 1.21
SRRM3-205ENST00000612155 DGKHQ86XP1 1220 aa22.61■■□□□ 1.21
SRRM3-205ENST00000612155 OTUD5Q96G74 571 aa22.61■■□□□ 1.21
SRRM3-205ENST00000612155 USP17L5A8MUK1 530 aa22.6■■□□□ 1.21
SRRM3-205ENST00000612155 SPP2Q13103 211 aa22.6■■□□□ 1.21
SRRM3-205ENST00000612155 LDLRAD1Q5T700 205 aa22.6■■□□□ 1.21
SRRM3-205ENST00000612155 CCAR1Q8IX12 1150 aaKnown RBP22.6■■□□□ 1.21
SRRM3-205ENST00000612155 TNMDQ9H2S6 317 aa22.6■■□□□ 1.21
SRRM3-205ENST00000612155 TAOK2Q9UL54 1235 aa22.6■■□□□ 1.21
SRRM3-205ENST00000612155 SNW1Q13573 536 aaKnown RBP22.6■■□□□ 1.21
SRRM3-205ENST00000612155 MYSM1Q5VVJ2 828 aa22.6■■□□□ 1.21
SRRM3-205ENST00000612155 ZNF654Q8IZM8 581 aa22.6■■□□□ 1.21
SRRM3-205ENST00000612155 MRVI1Q9Y6F6 885 aa22.6■■□□□ 1.21
SRRM3-205ENST00000612155 HUNKP57058 714 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 NOL9Q5SY16 702 aaKnown RBP22.59■■□□□ 1.21
SRRM3-205ENST00000612155 KRT40Q6A162 431 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 LINC00301Q8NCQ3 95 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 NYAP2Q9P242 653 aa22.59■■□□□ 1.21
SRRM3-205ENST00000612155 AP5Z1O43299 807 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms