RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 SIAH1Q8IUQ4 282 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 PHF20Q9BVI0 1012 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 FOXP1Q9H334 677 aaPredicted RBP14.2□□□□□ -0.14
CBWD1-220ENST00000612045 RNF181Q9P0P0 153 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 KCNA4P22459 653 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 GSE1Q14687 1217 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 CAVIN1Q6NZI2 390 aaKnown RBP14.2□□□□□ -0.14
CBWD1-220ENST00000612045 NOSTRINQ8IVI9 506 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 TEPSINQ96N21 525 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 CPVLQ9H3G5 476 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 RCOR1Q9UKL0 485 aa14.2□□□□□ -0.14
CBWD1-220ENST00000612045 FRMPD2Q68DX3 1309 aaPredicted RBP14.19□□□□□ -0.14
CBWD1-220ENST00000612045 ZNF543Q08ER8 600 aa14.19□□□□□ -0.14
CBWD1-220ENST00000612045 TRPM4Q8TD43 1214 aa14.19□□□□□ -0.14
CBWD1-220ENST00000612045 NR5A1Q13285 461 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 TPRNQ4KMQ1 711 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 OXER1Q8TDS5 423 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 UBA5Q9GZZ9 404 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 DEFB129Q9H1M3 183 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 POLR3EQ9NVU0 708 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 CLIC4Q9Y696 253 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 KRT2P35908 639 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 EPS15P42566 896 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 GPATCH4Q5T3I0 446 aaKnown RBP14.18□□□□□ -0.14
CBWD1-220ENST00000612045 C9orf131Q5VYM1 1079 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 RRP36Q96EU6 259 aaKnown RBP14.18□□□□□ -0.14
CBWD1-220ENST00000612045 RIOX1Q9H6W3 641 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 BRMS1Q9HCU9 246 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 GPCPD1Q9NPB8 672 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 SH3GLB2Q9NR46 395 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 ZBTB21Q9ULJ3 1066 aa14.18□□□□□ -0.14
CBWD1-220ENST00000612045 DDNO94850 711 aaPredicted RBP14.17□□□□□ -0.14
CBWD1-220ENST00000612045 NASPP49321 788 aaPredicted RBP14.17□□□□□ -0.14
CBWD1-220ENST00000612045 NLRP5P59047 1200 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 NPY5RQ15761 445 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 ANGEL2Q5VTE6 544 aaKnown RBP14.17□□□□□ -0.14
CBWD1-220ENST00000612045 ANO1Q5XXA6 986 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 SLFN13Q68D06 897 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 WWC2Q6AWC2 1192 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 LINC00301Q8NCQ3 95 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 DCAF4Q8WV16 495 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 GPKOWQ92917 476 aaPredicted RBP eCLIP14.17□□□□□ -0.14
CBWD1-220ENST00000612045 PGBD1Q96JS3 809 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 VAT1LQ9HCJ6 419 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 TMEM63CQ9P1W3 806 aa14.17□□□□□ -0.14
CBWD1-220ENST00000612045 GOLGA6L4A6NEF3 574 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 YEATS4O95619 227 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 CAP2P40123 477 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 HIRAP54198 1017 aaPredicted RBP14.16□□□□□ -0.14
CBWD1-220ENST00000612045 CCDC96Q2M329 555 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 KCTD1Q719H9 257 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 HEATR3Q7Z4Q2 680 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 HOMER1Q86YM7 354 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 APOBEC3FQ8IUX4 373 aaKnown RBP14.16□□□□□ -0.14
CBWD1-220ENST00000612045 GMCL1P1Q8NEA9 526 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 BARHL2Q9NY43 387 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 SEC63Q9UGP8 760 aaKnown RBP14.16□□□□□ -0.14
CBWD1-220ENST00000612045 SYNPO2Q9UMS6 1093 aa14.16□□□□□ -0.14
CBWD1-220ENST00000612045 A0A1W2PRG0 241 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 PHF20L1A8MW92 1017 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 F5H6K3 240 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 STXBP3O00186 592 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 RAD21O60216 631 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 CALML3P27482 149 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 SLC1A4P43007 532 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 KLRC3Q07444 240 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 STK38Q15208 465 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 TTBK2Q6IQ55 1244 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 FAM177A1Q8N128 213 aaPredicted RBP14.15□□□□□ -0.14
CBWD1-220ENST00000612045 PIGSQ96S52 555 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 SOCS7O14512 581 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 NDUFB10O96000 172 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 TOB1P50616 345 aaPredicted RBP14.15□□□□□ -0.14
CBWD1-220ENST00000612045 SF3A1Q15459 793 aaKnown RBP14.15□□□□□ -0.14
CBWD1-220ENST00000612045 ZSCAN23Q3MJ62 389 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 RILPL1Q5EBL4 403 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 CCDC148Q8NFR7 591 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 KCNG4Q8TDN1 519 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 TNFRSF25Q93038 417 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 GMCL1Q96IK5 515 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 JMJD4Q9H9V9 463 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 ARHGEF10LQ9HCE6 1279 aa14.15□□□□□ -0.14
CBWD1-220ENST00000612045 SPTLC2O15270 562 aa14.14□□□□□ -0.15
CBWD1-220ENST00000612045 ASNSP08243 561 aa14.14□□□□□ -0.15
CBWD1-220ENST00000612045 LMOD1P29536 600 aaPredicted RBP14.14□□□□□ -0.15
CBWD1-220ENST00000612045 ME1P48163 572 aa14.14□□□□□ -0.15
CBWD1-220ENST00000612045 SLC39A14Q15043 492 aa14.14□□□□□ -0.15
CBWD1-220ENST00000612045 GPR162Q16538 588 aa14.14□□□□□ -0.15
CBWD1-220ENST00000612045 NBPF12Q5TAG4 269 aaPredicted RBP14.14□□□□□ -0.15
CBWD1-220ENST00000612045 ADGRF4Q8IZF3 695 aa14.14□□□□□ -0.15
CBWD1-220ENST00000612045 SYAP1Q96A49 352 aaPredicted RBP14.14□□□□□ -0.15
CBWD1-220ENST00000612045 GGA3Q9NZ52 723 aa14.14□□□□□ -0.15
CBWD1-220ENST00000612045 ISY1Q9ULR0 285 aaKnown RBP14.14□□□□□ -0.15
CBWD1-220ENST00000612045 PCDHA4Q9UN74 947 aa14.14□□□□□ -0.15
CBWD1-220ENST00000612045 SLC16A2P36021 539 aa14.13□□□□□ -0.15
CBWD1-220ENST00000612045 ECE1P42892 770 aa14.13□□□□□ -0.15
CBWD1-220ENST00000612045 EARS2Q5JPH6 523 aaKnown RBP14.13□□□□□ -0.15
CBWD1-220ENST00000612045 GALNT17Q6IS24 598 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms